Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PDGFBP01127 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFBP01127 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFBP01127 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.57□□□□□ -1.68
PDGFBP01127 AC022417.1-201ENST00000624768 1303 ntBASIC4.57□□□□□ -1.68
PDGFBP01127 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFBP01127 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.57□□□□□ -1.68
PDGFBP01127 RNU6-883P-201ENST00000384597 107 ntBASIC4.57□□□□□ -1.68
PDGFBP01127 MIR483-201ENST00000385070 76 ntBASIC4.57□□□□□ -1.68
PDGFBP01127 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.57□□□□□ -1.68
PDGFBP01127 CCNB2P1-201ENST00000399411 1150 ntBASIC4.57□□□□□ -1.68
PDGFBP01127 RPL21P65-201ENST00000406094 466 ntBASIC4.57□□□□□ -1.68
PDGFBP01127 CYCSP10-201ENST00000417973 294 ntBASIC4.57□□□□□ -1.68
PDGFBP01127 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.57□□□□□ -1.68
PDGFBP01127 RPL23AP52-201ENST00000439311 478 ntBASIC4.57□□□□□ -1.68
PDGFBP01127 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFBP01127 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.57□□□□□ -1.68
PDGFBP01127 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.57□□□□□ -1.68
PDGFBP01127 RPS6P2-201ENST00000454208 705 ntBASIC4.57□□□□□ -1.68
PDGFBP01127 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.57□□□□□ -1.68
PDGFBP01127 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFBP01127 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.57□□□□□ -1.68
PDGFBP01127 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.57□□□□□ -1.68
PDGFBP01127 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFBP01127 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.57□□□□□ -1.68
PDGFBP01127 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.57□□□□□ -1.68
PDGFBP01127 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.57□□□□□ -1.68
PDGFBP01127 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFBP01127 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFBP01127 TVP23BP1-201ENST00000557500 617 ntBASIC4.57□□□□□ -1.68
PDGFBP01127 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.57□□□□□ -1.68
PDGFBP01127 MIR4512-201ENST00000583257 77 ntBASIC4.57□□□□□ -1.68
PDGFBP01127 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.57□□□□□ -1.68
PDGFBP01127 AP004607.9-201ENST00000618202 316 ntBASIC4.57□□□□□ -1.68
PDGFBP01127 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
PDGFBP01127 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFBP01127 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
PDGFBP01127 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFBP01127 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.57□□□□□ -1.68
PDGFBP01127 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFBP01127 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PDGFBP01127 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PDGFBP01127 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFBP01127 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
PDGFBP01127 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
PDGFBP01127 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PDGFBP01127 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
PDGFBP01127 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFBP01127 AC092376.2-201ENST00000622621 4116 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
PDGFBP01127 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.56□□□□□ -1.68
PDGFBP01127 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.56□□□□□ -1.68
PDGFBP01127 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFBP01127 RAD1P1-201ENST00000231383 813 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PDGFBP01127 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.56□□□□□ -1.68
PDGFBP01127 RNU6-317P-201ENST00000384031 107 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.56□□□□□ -1.68
PDGFBP01127 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.56□□□□□ -1.68
PDGFBP01127 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.56□□□□□ -1.68
PDGFBP01127 ZFAND6P1-201ENST00000434138 605 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 MED6P1-201ENST00000439659 713 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.56□□□□□ -1.68
PDGFBP01127 AL500527.1-201ENST00000448532 255 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 AC006511.1-201ENST00000470614 315 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.56□□□□□ -1.68
PDGFBP01127 AC069304.1-201ENST00000491593 704 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 AC098799.3-201ENST00000506095 438 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
PDGFBP01127 AC008958.1-201ENST00000511047 682 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.56□□□□□ -1.68
PDGFBP01127 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.56□□□□□ -1.68
PDGFBP01127 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFBP01127 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.56□□□□□ -1.68
PDGFBP01127 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.56□□□□□ -1.68
PDGFBP01127 AL731537.2-201ENST00000561565 951 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 AL109741.3-201ENST00000561748 592 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.56□□□□□ -1.68
PDGFBP01127 MIR4298-201ENST00000584380 73 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.56□□□□□ -1.68
PDGFBP01127 AC020923.1-201ENST00000624021 917 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 AC015726.3-201ENST00000624501 418 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 AC024023.1-201ENST00000624530 922 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 AC006453.5-201ENST00000636451 619 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFBP01127 AC011447.7-201ENST00000624228 1590 ntBASIC4.56□□□□□ -1.68
PDGFBP01127 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFBP01127 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PDGFBP01127 FAM91A3P-201ENST00000456826 2544 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFBP01127 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFBP01127 AC106871.1-201ENST00000568324 3102 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFBP01127 RLIMP1-201ENST00000339626 1680 ntBASIC4.55□□□□□ -1.68
PDGFBP01127 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFBP01127 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.55□□□□□ -1.68
PDGFBP01127 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PDGFBP01127 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFBP01127 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PDGFBP01127 AL391684.1-202ENST00000641293 1636 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms