Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 RPL12P9-201ENST00000412942 488 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 VTA1P1-201ENST00000414044 866 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AL645608.4-201ENST00000423619 154 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 RPS27AP12-201ENST00000429552 465 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 RPS17P8-201ENST00000434525 335 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AC069540.1-201ENST00000446320 988 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 H2AFZP5-201ENST00000446960 382 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 RPL7P31-201ENST00000450192 724 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 RNA5SP103-201ENST00000459503 118 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 RN7SL558P-201ENST00000497468 299 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AC106806.2-201ENST00000509365 500 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 COX6B1P6-201ENST00000522347 255 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 OR4A2P-201ENST00000527276 913 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 DEFB109D-201ENST00000529497 240 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AL121594.4-201ENST00000556211 1196 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 MIR3939-201ENST00000582614 106 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AC073091.2-201ENST00000603205 907 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AC115286.1-201ENST00000604298 434 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AC023043.4-201ENST00000612081 449 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AC004232.3-201ENST00000622977 525 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 TLK1P1-201ENST00000456760 2440 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 RAD17P1-201ENST00000418130 2042 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 AC007390.2-201ENST00000606229 3803 ntBASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDHGA1Q9Y5H4 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 HSPA8P19-201ENST00000505359 1517 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AL049737.1-201ENST00000413920 1403 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 OR10J6P-201ENST00000289731 930 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 UBBP2-201ENST00000376781 231 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AC234782.4-201ENST00000417646 1048 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 NDUFS5P3-201ENST00000450668 321 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 RPL23AP24-201ENST00000458203 385 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 MIR2116-201ENST00000517221 80 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AC100784.1-201ENST00000522790 310 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AP001781.1-201ENST00000530977 207 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AC084824.1-201ENST00000550917 1005 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AC116553.2-201ENST00000564203 463 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 BNIP3P33-201ENST00000598912 569 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 ABI1P1-201ENST00000603375 1120 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AL133338.2-201ENST00000604292 736 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AL133243.1-201ENST00000614487 366 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AL022401.1-201ENST00000619498 108 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 AC067852.7-201ENST00000623270 535 ntBASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHGA1Q9Y5H4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms