Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB7Q9Y5E2 AL137100.1-201ENST00000556703 1620 ntBASIC5.21□□□□□ -1.58
PCDHB7Q9Y5E2 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
PCDHB7Q9Y5E2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB7Q9Y5E2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB7Q9Y5E2 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB7Q9Y5E2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.21□□□□□ -1.58
PCDHB7Q9Y5E2 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AL442639.1-201ENST00000625030 1899 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 IGKV7-3-201ENST00000357453 298 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 RNU6-353P-201ENST00000364266 108 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 SNORA70.2-201ENST00000364506 135 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 RNU6-224P-201ENST00000384055 107 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 RNU6-225P-201ENST00000384613 103 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 U3.22-201ENST00000391120 215 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 RPS3AP37-201ENST00000419176 745 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 LINC00993-201ENST00000420453 540 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AP001324.1-201ENST00000428553 399 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 RPS17P8-201ENST00000434525 335 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AC068135.1-201ENST00000446164 246 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 RNU7-140P-201ENST00000459546 60 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AC104687.1-201ENST00000485829 412 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 HPRT1P2-201ENST00000505250 544 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 ENPP7P11-201ENST00000505915 627 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 IGBP1P5-201ENST00000507524 1000 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AC091868.1-201ENST00000508746 304 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AC008565.1-201ENST00000509046 885 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AC104108.1-201ENST00000509930 412 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AC124293.1-201ENST00000530034 493 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 ZNF92P3-201ENST00000596594 954 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AC025811.1-201ENST00000604312 472 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 Z95327.3-201ENST00000610385 572 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 MIR7973-1-201ENST00000614683 76 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AC109454.4-201ENST00000623411 649 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AC120349.3-201ENST00000624377 529 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 OR1S1-201ENST00000624470 978 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 BX649567.1-201ENST00000642071 1134 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 MAPK10-328ENST00000641553 4009 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AC010300.1-201ENST00000600671 5134 ntBASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB7Q9Y5E2 AC002525.1-201ENST00000624392 1622 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 MTND4P8-201ENST00000514997 1362 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 DDX18P4-201ENST00000511690 1966 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 RNU1-87P-201ENST00000363727 170 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 SNORA62.2-201ENST00000364672 152 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 AC068538.1-201ENST00000376856 336 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 Y_RNA.472-201ENST00000384322 102 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 RNU6-1242P-201ENST00000391052 103 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 AC119751.3-201ENST00000399720 670 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 TAF13P2-201ENST00000416876 286 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 ATG4AP1-201ENST00000416893 538 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 RPS24P7-201ENST00000416921 246 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 KRR1P1-201ENST00000419430 803 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 AC073143.1-201ENST00000436316 395 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 MTCO2P20-201ENST00000437339 673 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 CASP3P1-201ENST00000446037 609 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 AL162591.2-201ENST00000449634 317 ntBASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDHB7Q9Y5E2 AL133244.1-201ENST00000456007 258 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 195.4 ms