Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 ELOCP24-201ENST00000456370 334 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 NXT1P1-201ENST00000458481 316 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 AC091885.1-201ENST00000506658 268 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 RNU6-1003P-201ENST00000517099 105 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 OR5D2P-201ENST00000524390 911 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 HMGB1P6-201ENST00000569046 646 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 AC009120.2-204ENST00000621548 2032 ntBASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
HPS5Q9UPZ3 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AF287957.1-201ENST00000607368 1595 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 MTND5P19-201ENST00000424872 1794 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 Y_RNA.447-201ENST00000384184 113 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 RNU6-769P-201ENST00000384407 104 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 RPL7P25-201ENST00000404151 721 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 SNORA11C-201ENST00000408532 129 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AL035422.1-201ENST00000414193 397 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 RPSAP65-201ENST00000429660 595 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 RBMY2QP-201ENST00000429799 1147 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 PRPF38AP2-201ENST00000438179 851 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 HMGB1P12-201ENST00000438594 598 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 PFN1P11-201ENST00000445829 389 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 SLC31A1P1-201ENST00000451221 567 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AC017015.1-201ENST00000477387 286 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 RN7SL629P-201ENST00000489622 285 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 OR52H2P-201ENST00000514607 902 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 RNU6-583P-201ENST00000516012 92 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 RNA5SP135-201ENST00000517019 125 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 SNRPCP6-201ENST00000528310 210 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AL589743.6-201ENST00000611025 117 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AC005899.7-201ENST00000618199 588 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 U2.1-201ENST00000618978 145 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AL354702.2-202ENST00000641481 890 ntBASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HPS5Q9UPZ3 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
HPS5Q9UPZ3 AL136531.3-201ENST00000624378 3658 ntBASIC7.84□□□□□ -1.15
HPS5Q9UPZ3 RAD17P2-201ENST00000451754 1977 ntBASIC7.84□□□□□ -1.15
HPS5Q9UPZ3 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
HPS5Q9UPZ3 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
HPS5Q9UPZ3 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.84□□□□□ -1.15
HPS5Q9UPZ3 AL359091.1-201ENST00000449048 1734 ntBASIC7.84□□□□□ -1.15
HPS5Q9UPZ3 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.84□□□□□ -1.15
HPS5Q9UPZ3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
HPS5Q9UPZ3 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
HPS5Q9UPZ3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
HPS5Q9UPZ3 AC125603.4-201ENST00000621942 2699 ntBASIC7.84□□□□□ -1.15
HPS5Q9UPZ3 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
HPS5Q9UPZ3 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
HPS5Q9UPZ3 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
HPS5Q9UPZ3 AC006020.1-201ENST00000420179 1854 ntBASIC7.84□□□□□ -1.15
HPS5Q9UPZ3 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms