Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 SDR42E1P4-201ENST00000620894 481 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC145207.9-201ENST00000623802 325 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AL354702.2-202ENST00000641481 890 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.83□□□□□ -1
TRIM35Q9UPQ4 AC011416.1-201ENST00000514947 1732 ntBASIC8.83□□□□□ -1
TRIM35Q9UPQ4 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 SDAD1P2-201ENST00000441308 2028 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 SNORD3E-201ENST00000362899 217 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 RNU1-55P-201ENST00000365510 158 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 RNU6-48P-201ENST00000384161 107 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 RNU6-452P-201ENST00000384406 107 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AL359694.1-201ENST00000403247 604 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 RPS4XP9-201ENST00000405151 780 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AL606923.1-201ENST00000406616 190 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 RNU2-71P-201ENST00000411395 189 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AL136133.1-201ENST00000413694 376 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AC114814.2-201ENST00000419195 485 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AL589794.1-201ENST00000424971 390 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AC239367.3-201ENST00000428996 814 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 RPS3AP54-201ENST00000435535 734 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 ATP5LP2-201ENST00000440646 311 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AC022080.2-201ENST00000452932 533 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 RPL35AP28-201ENST00000459730 331 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AC095057.1-201ENST00000507583 168 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AC024451.1-201ENST00000508013 779 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 HMGB2P1-201ENST00000591146 634 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AC073657.2-201ENST00000605661 303 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AP004247.3-201ENST00000608682 624 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 LRRC37A12P-201ENST00000454917 1801 ntBASIC8.82□□□□□ -1
TRIM35Q9UPQ4 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC8.82□□□□□ -1
TRIM35Q9UPQ4 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC011978.2-201ENST00000569835 2054 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 SNRPEP3-201ENST00000338402 276 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 Y_RNA.20-201ENST00000362479 113 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 RNU6-1252P-201ENST00000363054 104 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 Y_RNA.297-201ENST00000364950 91 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 RNU6-1140P-201ENST00000410517 106 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC048351.1-201ENST00000420064 602 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 RPL7P29-201ENST00000437151 728 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 Z83838.1-202ENST00000456225 839 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC110749.1-201ENST00000462007 357 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 RN7SL382P-201ENST00000482631 282 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 SCG5-207ENST00000497208 949 ntTSL 5 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 MINOS1P4-201ENST00000515470 318 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 RNU6-470P-201ENST00000515954 104 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 HMGB1P23-201ENST00000518743 568 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC011853.1-201ENST00000518911 454 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 HSPE1P20-201ENST00000538133 289 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC138761.3-201ENST00000579993 334 ntBASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC8.81□□□□□ -1
TRIM35Q9UPQ4 AC091133.5-201ENST00000603088 301 ntBASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms