Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC004158.1-201ENST00000564508 4319 ntBASIC5.24□□□□□ -1.57
SEC61A2Q9H9S3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AP005435.3-201ENST00000531260 3198 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 CBX3P1-201ENST00000325243 554 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 RNA5SP453-201ENST00000362503 119 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 MIR1303-201ENST00000408625 86 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 RPL35AP3-201ENST00000414680 288 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 USP9YP13-201ENST00000417797 480 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AL389915.1-201ENST00000422463 466 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 ELOCP14-201ENST00000428070 331 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AP001324.1-201ENST00000428553 399 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 SKP1P3-201ENST00000429280 487 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AL445928.1-201ENST00000435545 222 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 ELOCP7-201ENST00000439968 331 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AC023141.8-201ENST00000442554 208 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 RPL31P44-201ENST00000447680 377 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 RN7SL193P-201ENST00000491708 276 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 SNX5P1-201ENST00000505757 1041 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AC091133.4-201ENST00000511142 308 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 Y_RNA.667-201ENST00000516212 107 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 RNA5SP438-201ENST00000516561 112 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 MIR2117-201ENST00000516780 80 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AP003396.4-201ENST00000527574 265 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AC087276.1-201ENST00000529659 480 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 OR8L1P-201ENST00000534005 955 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AP005119.2-201ENST00000579735 1105 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AP001004.1-201ENST00000582468 324 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 KPNA2P3-201ENST00000584190 848 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AC233280.2-201ENST00000603917 1070 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AL049634.3-201ENST00000604968 457 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AL359535.1-201ENST00000612100 1087 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AP004607.3-201ENST00000530354 3915 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AC005005.4-201ENST00000623789 16698 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 QRSL1P1-201ENST00000400977 1540 ntBASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SEC61A2Q9H9S3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 CCT8P1-201ENST00000413611 1657 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AC091305.2-201ENST00000624049 1576 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 RN7SKP128-201ENST00000364270 303 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 RNU5E-5P-201ENST00000365379 116 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 RNU6-1009P-201ENST00000390996 107 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 AL589647.1-201ENST00000402485 466 ntBASIC5.22□□□□□ -1.57
SEC61A2Q9H9S3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms