Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AL354692.1-201ENST00000423044 315 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 DEFB130D-201ENST00000426866 237 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 FO393414.1-201ENST00000428697 1184 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AL645931.1-201ENST00000439737 410 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 OR52J1P-201ENST00000450596 932 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 FCF1P6-201ENST00000456841 595 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 RPL23AP56-201ENST00000460778 453 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC018635.1-201ENST00000468292 1030 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 RPL21P103-201ENST00000479921 488 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC138938.1-201ENST00000515431 782 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 RNA5SP249-201ENST00000516127 99 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC104115.2-201ENST00000523026 687 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AP003066.2-201ENST00000529375 555 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 BRD9P1-201ENST00000529855 560 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 OR5D15P-201ENST00000531671 942 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC087894.1-201ENST00000538359 518 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 GCSHP4-201ENST00000538792 439 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC027104.1-201ENST00000563702 681 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 SNORA74C-1-201ENST00000580726 201 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 BNIP3P39-201ENST00000601077 554 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 LLPHP1-201ENST00000603571 367 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC020910.3-201ENST00000603701 874 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC010424.2-201ENST00000607594 443 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AF129408.1-201ENST00000608767 431 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AC023509.5-201ENST00000617434 807 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 MIR6730-201ENST00000622213 67 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AL356489.2-201ENST00000566968 3528 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 NSRP1P1-201ENST00000444067 1693 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 LINC01355-201ENST00000566551 5444 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 IRF5P1-201ENST00000504852 2164 ntBASIC4.5□□□□□ -1.69
NUP54Q7Z3B4 AL731532.2-201ENST00000623542 1953 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AC008758.3-201ENST00000507003 1829 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 RNU6-207P-201ENST00000384137 107 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 RPL23AP59-201ENST00000399415 461 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 HMGB3P18-201ENST00000406327 590 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AC114755.2-201ENST00000413520 361 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 PRELID3BP11-201ENST00000414230 479 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 TBCAP2-201ENST00000416175 326 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 OR2AH1P-201ENST00000425717 928 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AL590762.4-201ENST00000425885 253 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AC007559.1-201ENST00000428736 355 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 NMNAT1P2-201ENST00000435192 860 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 H2AFZP5-201ENST00000446960 382 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AC000111.2-201ENST00000448200 210 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AL096803.2-201ENST00000450032 677 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AC234781.3-201ENST00000452540 973 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AL035407.2-201ENST00000454090 378 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 RPL21P18-201ENST00000469899 480 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 AC231760.1-201ENST00000498002 260 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 RNA5SP303-201ENST00000516192 130 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 RN7SKP283-201ENST00000517197 270 ntBASIC4.49□□□□□ -1.69
NUP54Q7Z3B4 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms