Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 Y_RNA.578-201ENST00000390903 88 ntBASIC4.57□□□□□ -1.68
LTBQ06643 RN7SKP114-201ENST00000410327 279 ntBASIC4.57□□□□□ -1.68
LTBQ06643 RNU4-72P-201ENST00000410754 173 ntBASIC4.57□□□□□ -1.68
LTBQ06643 RN7SKP126-201ENST00000411143 300 ntBASIC4.57□□□□□ -1.68
LTBQ06643 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBQ06643 RAP1BP1-201ENST00000412709 553 ntBASIC4.57□□□□□ -1.68
LTBQ06643 AL031779.1-201ENST00000415663 330 ntBASIC4.57□□□□□ -1.68
LTBQ06643 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBQ06643 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 ELOCP9-201ENST00000418624 239 ntBASIC4.57□□□□□ -1.68
LTBQ06643 PTP4A1P5-201ENST00000420305 455 ntBASIC4.57□□□□□ -1.68
LTBQ06643 MGAT2P2-201ENST00000427194 797 ntBASIC4.57□□□□□ -1.68
LTBQ06643 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBQ06643 AL390023.1-201ENST00000428836 262 ntBASIC4.57□□□□□ -1.68
LTBQ06643 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.57□□□□□ -1.68
LTBQ06643 USP9YP14-201ENST00000430663 563 ntBASIC4.57□□□□□ -1.68
LTBQ06643 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBQ06643 KCTD10P1-201ENST00000434203 625 ntBASIC4.57□□□□□ -1.68
LTBQ06643 HMGB3P10-201ENST00000434734 572 ntBASIC4.57□□□□□ -1.68
LTBQ06643 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBQ06643 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBQ06643 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.57□□□□□ -1.68
LTBQ06643 AL450023.3-201ENST00000440592 271 ntBASIC4.57□□□□□ -1.68
LTBQ06643 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.57□□□□□ -1.68
LTBQ06643 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LTBQ06643 SEPT14P24-201ENST00000447236 180 ntBASIC4.57□□□□□ -1.68
LTBQ06643 MRPL35P2-201ENST00000448009 511 ntBASIC4.57□□□□□ -1.68
LTBQ06643 AC234781.3-201ENST00000452540 973 ntBASIC4.57□□□□□ -1.68
LTBQ06643 AC244505.3-201ENST00000454598 187 ntBASIC4.57□□□□□ -1.68
LTBQ06643 GTF2IP12-201ENST00000456547 356 ntBASIC4.57□□□□□ -1.68
LTBQ06643 OR11I1P-201ENST00000486033 954 ntBASIC4.57□□□□□ -1.68
LTBQ06643 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.57□□□□□ -1.68
LTBQ06643 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.57□□□□□ -1.68
LTBQ06643 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.57□□□□□ -1.68
LTBQ06643 MTND4P2-201ENST00000507767 1203 ntBASIC4.57□□□□□ -1.68
LTBQ06643 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBQ06643 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBQ06643 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.57□□□□□ -1.68
LTBQ06643 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBQ06643 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBQ06643 OR5AN2P-201ENST00000534535 896 ntBASIC4.57□□□□□ -1.68
LTBQ06643 AC011611.5-201ENST00000552477 578 ntBASIC4.57□□□□□ -1.68
LTBQ06643 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.57□□□□□ -1.68
LTBQ06643 NDUFB4P11-201ENST00000560510 395 ntBASIC4.57□□□□□ -1.68
LTBQ06643 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.57□□□□□ -1.68
LTBQ06643 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.57□□□□□ -1.68
LTBQ06643 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.57□□□□□ -1.68
LTBQ06643 NBR2-204ENST00000587322 63 ntBASIC4.57□□□□□ -1.68
LTBQ06643 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.57□□□□□ -1.68
LTBQ06643 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.57□□□□□ -1.68
LTBQ06643 AC068790.4-201ENST00000602474 263 ntBASIC4.57□□□□□ -1.68
LTBQ06643 AL020997.3-201ENST00000602843 359 ntBASIC4.57□□□□□ -1.68
LTBQ06643 AC024257.5-201ENST00000612739 531 ntBASIC4.57□□□□□ -1.68
LTBQ06643 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.57□□□□□ -1.68
LTBQ06643 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.57□□□□□ -1.68
LTBQ06643 AC007671.2-201ENST00000637344 619 ntBASIC4.57□□□□□ -1.68
LTBQ06643 MIR1322-201ENST00000638013 71 ntBASIC4.57□□□□□ -1.68
LTBQ06643 OR8B1P-202ENST00000641132 1178 ntBASIC4.57□□□□□ -1.68
LTBQ06643 AC068870.3-201ENST00000625077 2536 ntBASIC4.57□□□□□ -1.68
LTBQ06643 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.57□□□□□ -1.68
LTBQ06643 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.57□□□□□ -1.68
LTBQ06643 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.57□□□□□ -1.68
LTBQ06643 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LTBQ06643 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LTBQ06643 INTS6P1-201ENST00000504674 2530 ntBASIC4.56□□□□□ -1.68
LTBQ06643 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LTBQ06643 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
LTBQ06643 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LTBQ06643 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LTBQ06643 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.56□□□□□ -1.68
LTBQ06643 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LTBQ06643 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LTBQ06643 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.56□□□□□ -1.68
LTBQ06643 AP000542.2-201ENST00000623199 6179 ntBASIC4.56□□□□□ -1.68
LTBQ06643 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LTBQ06643 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LTBQ06643 AC126755.2-208ENST00000327792 462 ntBASIC4.56□□□□□ -1.68
LTBQ06643 AC138969.1-213ENST00000331436 462 ntBASIC4.56□□□□□ -1.68
LTBQ06643 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LTBQ06643 RN7SKP113-201ENST00000363891 295 ntBASIC4.56□□□□□ -1.68
LTBQ06643 BMS1P3-201ENST00000372011 932 ntBASIC4.56□□□□□ -1.68
LTBQ06643 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LTBQ06643 SNORD116-4-201ENST00000384733 96 ntBASIC4.56□□□□□ -1.68
LTBQ06643 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.56□□□□□ -1.68
LTBQ06643 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.56□□□□□ -1.68
LTBQ06643 AC233289.1-201ENST00000403700 508 ntBASIC4.56□□□□□ -1.68
LTBQ06643 AC010385.1-201ENST00000412374 256 ntBASIC4.56□□□□□ -1.68
LTBQ06643 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LTBQ06643 BTF3P8-201ENST00000414577 526 ntBASIC4.56□□□□□ -1.68
LTBQ06643 RPS7P9-201ENST00000414704 586 ntBASIC4.56□□□□□ -1.68
LTBQ06643 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.56□□□□□ -1.68
LTBQ06643 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms