Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.96□□□□□ -1.62
CLCN3P51790 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.96□□□□□ -1.62
CLCN3P51790 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CLCN3P51790 MIR3939-201ENST00000582614 106 ntBASIC4.96□□□□□ -1.62
CLCN3P51790 AC008507.2-201ENST00000588402 1176 ntBASIC4.96□□□□□ -1.62
CLCN3P51790 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.96□□□□□ -1.62
CLCN3P51790 CLIC4P2-201ENST00000601934 717 ntBASIC4.96□□□□□ -1.62
CLCN3P51790 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLCN3P51790 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.96□□□□□ -1.62
CLCN3P51790 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CLCN3P51790 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CLCN3P51790 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CLCN3P51790 AC090017.1-201ENST00000548612 1779 ntBASIC4.96□□□□□ -1.62
CLCN3P51790 SALL4P2-201ENST00000423288 2910 ntBASIC4.96□□□□□ -1.62
CLCN3P51790 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.96□□□□□ -1.62
CLCN3P51790 DHX9P1-201ENST00000436565 3076 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCN3P51790 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
CLCN3P51790 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCN3P51790 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCN3P51790 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCN3P51790 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCN3P51790 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CLCN3P51790 HSPA8P17-201ENST00000427029 1382 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCN3P51790 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCN3P51790 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
CLCN3P51790 RNU1-83P-201ENST00000363426 164 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 UBBP2-201ENST00000376781 231 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 AC234772.1-201ENST00000377927 937 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 RNU6-207P-201ENST00000384137 107 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.95□□□□□ -1.62
CLCN3P51790 MTATP6P31-201ENST00000406985 692 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCN3P51790 HMGB3P31-201ENST00000413333 595 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 AL445183.3-201ENST00000414168 502 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 RAD23BP1-201ENST00000421404 1227 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCN3P51790 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCN3P51790 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCN3P51790 RPS3AP54-201ENST00000435535 734 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCN3P51790 PHBP16-201ENST00000446318 950 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.95□□□□□ -1.62
CLCN3P51790 RN7SL98P-201ENST00000462271 300 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 AC010618.1-201ENST00000469924 477 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 RN7SL810P-201ENST00000493031 276 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCN3P51790 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.95□□□□□ -1.62
CLCN3P51790 RNA5SP464-201ENST00000516251 108 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCN3P51790 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.95□□□□□ -1.62
CLCN3P51790 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.95□□□□□ -1.62
CLCN3P51790 AL121594.4-201ENST00000556211 1196 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCN3P51790 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCN3P51790 MIR548Y-201ENST00000582739 110 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 MIR3138-201ENST00000585238 82 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 ARF4P1-201ENST00000605447 541 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCN3P51790 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.95□□□□□ -1.62
CLCN3P51790 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.95□□□□□ -1.62
CLCN3P51790 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.95□□□□□ -1.62
CLCN3P51790 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCN3P51790 AC114781.5-201ENST00000615297 108 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 AP000843.1-201ENST00000624880 701 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 AC006065.6-201ENST00000625201 545 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCN3P51790 AL445984.1-201ENST00000637834 659 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCN3P51790 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CLCN3P51790 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CLCN3P51790 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CLCN3P51790 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCN3P51790 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCN3P51790 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCN3P51790 GTF2H2B-203ENST00000508065 1432 ntBASIC4.95□□□□□ -1.62
CLCN3P51790 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCN3P51790 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.95□□□□□ -1.62
CLCN3P51790 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.95□□□□□ -1.62
CLCN3P51790 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLCN3P51790 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLCN3P51790 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.95□□□□□ -1.62
CLCN3P51790 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLCN3P51790 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLCN3P51790 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLCN3P51790 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CLCN3P51790 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLCN3P51790 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CLCN3P51790 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLCN3P51790 AL022393.1-201ENST00000625142 1677 ntBASIC4.94□□□□□ -1.62
CLCN3P51790 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CLCN3P51790 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CLCN3P51790 OR6C69P-201ENST00000394268 893 ntBASIC4.94□□□□□ -1.62
CLCN3P51790 ATF1P1-201ENST00000406040 927 ntBASIC4.94□□□□□ -1.62
CLCN3P51790 TCEA1P4-201ENST00000415066 844 ntBASIC4.94□□□□□ -1.62
CLCN3P51790 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.94□□□□□ -1.62
CLCN3P51790 AC012671.1-201ENST00000451912 203 ntBASIC4.94□□□□□ -1.62
CLCN3P51790 DHFRP3-201ENST00000455595 559 ntBASIC4.94□□□□□ -1.62
CLCN3P51790 AC053481.1-201ENST00000467217 306 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms