Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARSP26640 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARSP26640 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VARSP26640 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.92□□□□□ -1.3
VARSP26640 RNU6-1062P-201ENST00000383908 107 ntBASIC6.92□□□□□ -1.3
VARSP26640 Y_RNA.530-201ENST00000384587 101 ntBASIC6.92□□□□□ -1.3
VARSP26640 Y_RNA.556-201ENST00000384677 113 ntBASIC6.92□□□□□ -1.3
VARSP26640 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
VARSP26640 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VARSP26640 AC099535.1-201ENST00000408928 371 ntBASIC6.92□□□□□ -1.3
VARSP26640 AP000534.2-201ENST00000412729 568 ntBASIC6.92□□□□□ -1.3
VARSP26640 MICG-208ENST00000416822 132 ntBASIC6.92□□□□□ -1.3
VARSP26640 RPL7P10-201ENST00000417407 739 ntBASIC6.92□□□□□ -1.3
VARSP26640 AL604028.2-201ENST00000437848 788 ntBASIC6.92□□□□□ -1.3
VARSP26640 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.92□□□□□ -1.3
VARSP26640 AC007383.1-201ENST00000445875 636 ntBASIC6.92□□□□□ -1.3
VARSP26640 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.92□□□□□ -1.3
VARSP26640 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.92□□□□□ -1.3
VARSP26640 AC104308.1-201ENST00000454621 333 ntBASIC6.92□□□□□ -1.3
VARSP26640 RN7SL160P-201ENST00000468558 284 ntBASIC6.92□□□□□ -1.3
VARSP26640 RPS15AP17-201ENST00000470598 390 ntBASIC6.92□□□□□ -1.3
VARSP26640 RPL31P50-201ENST00000471002 296 ntBASIC6.92□□□□□ -1.3
VARSP26640 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.92□□□□□ -1.3
VARSP26640 AC110794.1-201ENST00000505816 425 ntBASIC6.92□□□□□ -1.3
VARSP26640 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC6.92□□□□□ -1.3
VARSP26640 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC6.92□□□□□ -1.3
VARSP26640 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6.92□□□□□ -1.3
VARSP26640 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC6.92□□□□□ -1.3
VARSP26640 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.92□□□□□ -1.3
VARSP26640 AC024405.1-201ENST00000532521 1042 ntBASIC6.92□□□□□ -1.3
VARSP26640 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.92□□□□□ -1.3
VARSP26640 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.92□□□□□ -1.3
VARSP26640 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.92□□□□□ -1.3
VARSP26640 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.92□□□□□ -1.3
VARSP26640 ULK4P1-202ENST00000565174 503 ntBASIC6.92□□□□□ -1.3
VARSP26640 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.92□□□□□ -1.3
VARSP26640 MIR4470-201ENST00000583453 72 ntBASIC6.92□□□□□ -1.3
VARSP26640 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.92□□□□□ -1.3
VARSP26640 AC245052.7-201ENST00000601161 359 ntBASIC6.92□□□□□ -1.3
VARSP26640 PRR13P7-201ENST00000605538 430 ntBASIC6.92□□□□□ -1.3
VARSP26640 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
VARSP26640 AC078938.1-201ENST00000620993 318 ntBASIC6.92□□□□□ -1.3
VARSP26640 AL138693.1-201ENST00000622219 129 ntBASIC6.92□□□□□ -1.3
VARSP26640 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.92□□□□□ -1.3
VARSP26640 OR52H1-202ENST00000641796 1061 ntBASIC6.92□□□□□ -1.3
VARSP26640 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARSP26640 AC007993.1-201ENST00000621298 2430 ntBASIC6.92□□□□□ -1.3
VARSP26640 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VARSP26640 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.92□□□□□ -1.3
VARSP26640 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VARSP26640 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARSP26640 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARSP26640 AC119744.1-201ENST00000454746 1715 ntBASIC6.92□□□□□ -1.3
VARSP26640 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARSP26640 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC6.92□□□□□ -1.3
VARSP26640 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VARSP26640 RNF6P1-201ENST00000444889 1784 ntBASIC6.92□□□□□ -1.3
VARSP26640 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.92□□□□□ -1.3
VARSP26640 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VARSP26640 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VARSP26640 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.92□□□□□ -1.3
VARSP26640 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.92□□□□□ -1.3
VARSP26640 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
VARSP26640 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.91□□□□□ -1.3
VARSP26640 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VARSP26640 AC092125.1-201ENST00000562568 1995 ntBASIC6.91□□□□□ -1.3
VARSP26640 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
VARSP26640 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
VARSP26640 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
VARSP26640 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VARSP26640 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
VARSP26640 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VARSP26640 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.91□□□□□ -1.3
VARSP26640 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VARSP26640 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.91□□□□□ -1.3
VARSP26640 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VARSP26640 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VARSP26640 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
VARSP26640 RPL32P3-201ENST00000359025 275 ntBASIC6.91□□□□□ -1.3
VARSP26640 RNA5SP472-201ENST00000363868 119 ntBASIC6.91□□□□□ -1.3
VARSP26640 Y_RNA.364-201ENST00000365532 101 ntBASIC6.91□□□□□ -1.3
VARSP26640 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
VARSP26640 RNU6-38P-201ENST00000384085 107 ntBASIC6.91□□□□□ -1.3
VARSP26640 Y_RNA.489-201ENST00000384410 101 ntBASIC6.91□□□□□ -1.3
VARSP26640 RNU6-1151P-201ENST00000384684 107 ntBASIC6.91□□□□□ -1.3
VARSP26640 MIR320B1-201ENST00000390209 79 ntBASIC6.91□□□□□ -1.3
VARSP26640 SNORA11D-201ENST00000408548 128 ntBASIC6.91□□□□□ -1.3
VARSP26640 SNORA11E-201ENST00000408778 128 ntBASIC6.91□□□□□ -1.3
VARSP26640 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.91□□□□□ -1.3
VARSP26640 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.91□□□□□ -1.3
VARSP26640 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.91□□□□□ -1.3
VARSP26640 RPS15AP12-201ENST00000419498 388 ntBASIC6.91□□□□□ -1.3
VARSP26640 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.91□□□□□ -1.3
VARSP26640 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC6.91□□□□□ -1.3
VARSP26640 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.91□□□□□ -1.3
VARSP26640 FABP7P2-201ENST00000429946 379 ntBASIC6.91□□□□□ -1.3
VARSP26640 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC6.91□□□□□ -1.3
VARSP26640 AC234771.4-201ENST00000441416 730 ntBASIC6.91□□□□□ -1.3
VARSP26640 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.91□□□□□ -1.3
VARSP26640 RNU6-333P-201ENST00000459117 107 ntBASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms