Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC8.41□□□□□ -1.06
CD44P16070 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.41□□□□□ -1.06
CD44P16070 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CD44P16070 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CD44P16070 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC8.41□□□□□ -1.06
CD44P16070 OR52B3P-201ENST00000314715 928 ntBASIC8.41□□□□□ -1.06
CD44P16070 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC8.41□□□□□ -1.06
CD44P16070 Y_RNA.331-201ENST00000365267 102 ntBASIC8.41□□□□□ -1.06
CD44P16070 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
CD44P16070 C9orf92-202ENST00000380685 379 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
CD44P16070 SNORA16.2-201ENST00000390991 127 ntBASIC8.41□□□□□ -1.06
CD44P16070 SNORD70.1-201ENST00000391007 85 ntBASIC8.41□□□□□ -1.06
CD44P16070 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
CD44P16070 HIST1H2BPS2-201ENST00000402707 340 ntBASIC8.41□□□□□ -1.06
CD44P16070 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC8.41□□□□□ -1.06
CD44P16070 EI24P1-201ENST00000416584 867 ntBASIC8.41□□□□□ -1.06
CD44P16070 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC8.41□□□□□ -1.06
CD44P16070 EEF1A1P25-201ENST00000495704 1267 ntBASIC8.41□□□□□ -1.06
CD44P16070 AC079768.1-201ENST00000503181 711 ntBASIC8.41□□□□□ -1.06
CD44P16070 EIF3KP1-201ENST00000513279 656 ntBASIC8.41□□□□□ -1.06
CD44P16070 SNORA70.23-201ENST00000517218 151 ntBASIC8.41□□□□□ -1.06
CD44P16070 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC8.41□□□□□ -1.06
CD44P16070 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
CD44P16070 LARP7P2-201ENST00000575306 125 ntBASIC8.41□□□□□ -1.06
CD44P16070 AC060771.1-201ENST00000582031 164 ntBASIC8.41□□□□□ -1.06
CD44P16070 RN7SL178P-201ENST00000582930 304 ntBASIC8.41□□□□□ -1.06
CD44P16070 AL162424.1-201ENST00000602325 221 ntBASIC8.41□□□□□ -1.06
CD44P16070 AC009570.1-201ENST00000609599 745 ntBASIC8.41□□□□□ -1.06
CD44P16070 AL451054.3-201ENST00000611115 776 ntBASIC8.41□□□□□ -1.06
CD44P16070 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC8.41□□□□□ -1.06
CD44P16070 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC8.41□□□□□ -1.06
CD44P16070 ANGPT2-203ENST00000523120 2997 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CD44P16070 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
CD44P16070 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CD44P16070 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CD44P16070 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CD44P16070 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.41□□□□□ -1.06
CD44P16070 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
CD44P16070 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
CD44P16070 Z75746.1-201ENST00000440243 2080 ntBASIC8.41□□□□□ -1.06
CD44P16070 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CD44P16070 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC8.4□□□□□ -1.06
CD44P16070 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC8.4□□□□□ -1.06
CD44P16070 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.4□□□□□ -1.06
CD44P16070 RLIMP1-201ENST00000339626 1680 ntBASIC8.4□□□□□ -1.06
CD44P16070 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CD44P16070 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
CD44P16070 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CD44P16070 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC8.4□□□□□ -1.06
CD44P16070 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CD44P16070 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.4□□□□□ -1.06
CD44P16070 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CD44P16070 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CD44P16070 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CD44P16070 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC8.4□□□□□ -1.06
CD44P16070 OR51A10P-201ENST00000307165 937 ntBASIC8.4□□□□□ -1.06
CD44P16070 Y_RNA.439-201ENST00000384119 94 ntBASIC8.4□□□□□ -1.06
CD44P16070 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CD44P16070 RPA3-204ENST00000406109 434 ntTSL 3 BASIC8.4□□□□□ -1.06
CD44P16070 BCRP8-201ENST00000412037 255 ntBASIC8.4□□□□□ -1.06
CD44P16070 RPL34P19-201ENST00000415903 342 ntBASIC8.4□□□□□ -1.06
CD44P16070 AC114491.1-201ENST00000416095 246 ntBASIC8.4□□□□□ -1.06
CD44P16070 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC8.4□□□□□ -1.06
CD44P16070 AC068137.1-201ENST00000429272 584 ntBASIC8.4□□□□□ -1.06
CD44P16070 AL389925.1-201ENST00000432257 728 ntBASIC8.4□□□□□ -1.06
CD44P16070 AL135929.1-201ENST00000449287 552 ntBASIC8.4□□□□□ -1.06
CD44P16070 RN7SL587P-201ENST00000459853 281 ntBASIC8.4□□□□□ -1.06
CD44P16070 RN7SL751P-201ENST00000473281 284 ntBASIC8.4□□□□□ -1.06
CD44P16070 RN7SL12P-201ENST00000473849 290 ntBASIC8.4□□□□□ -1.06
CD44P16070 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC8.4□□□□□ -1.06
CD44P16070 AC084198.1-201ENST00000477747 402 ntBASIC8.4□□□□□ -1.06
CD44P16070 AC233724.10-201ENST00000510454 409 ntBASIC8.4□□□□□ -1.06
CD44P16070 IGHVII-60-1-201ENST00000519079 256 ntBASIC8.4□□□□□ -1.06
CD44P16070 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC8.4□□□□□ -1.06
CD44P16070 LSM6P2-201ENST00000552208 177 ntBASIC8.4□□□□□ -1.06
CD44P16070 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC8.4□□□□□ -1.06
CD44P16070 MIR5582-201ENST00000579697 68 ntBASIC8.4□□□□□ -1.06
CD44P16070 AC004477.2-201ENST00000583349 192 ntTSL 3 BASIC8.4□□□□□ -1.06
CD44P16070 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC8.4□□□□□ -1.06
CD44P16070 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC8.4□□□□□ -1.06
CD44P16070 AC073488.2-201ENST00000631903 751 ntBASIC8.4□□□□□ -1.06
CD44P16070 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC8.4□□□□□ -1.06
CD44P16070 AC093909.5-201ENST00000621839 1799 ntBASIC8.4□□□□□ -1.07
CD44P16070 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CD44P16070 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
CD44P16070 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8.4□□□□□ -1.07
CD44P16070 MED12-202ENST00000374080 6795 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
CD44P16070 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
CD44P16070 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.39□□□□□ -1.07
CD44P16070 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CD44P16070 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
CD44P16070 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CD44P16070 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
CD44P16070 GNPAT-201ENST00000366647 2643 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CD44P16070 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.39□□□□□ -1.07
CD44P16070 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC8.39□□□□□ -1.07
CD44P16070 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CD44P16070 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CD44P16070 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
CD44P16070 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms