Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMAD6O43541 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
SMAD6O43541 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SMAD6O43541 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.86□□□□□ -1.63
SMAD6O43541 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SMAD6O43541 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SMAD6O43541 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SMAD6O43541 AL442639.1-201ENST00000625030 1899 ntBASIC4.86□□□□□ -1.63
SMAD6O43541 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
SMAD6O43541 MUC2-202ENST00000613187 4845 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SMAD6O43541 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SMAD6O43541 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.85□□□□□ -1.63
SMAD6O43541 MAPK10-304ENST00000641341 3984 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
SMAD6O43541 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SMAD6O43541 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SMAD6O43541 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SMAD6O43541 AC011155.1-201ENST00000316512 456 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 RNA5SP505-201ENST00000364748 108 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SMAD6O43541 Y_RNA.505-201ENST00000384489 102 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SMAD6O43541 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.85□□□□□ -1.63
SMAD6O43541 MTND4P22-201ENST00000413116 1169 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 UBE2V1P9-201ENST00000414760 368 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 AL590139.1-201ENST00000416267 400 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.85□□□□□ -1.63
SMAD6O43541 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.85□□□□□ -1.63
SMAD6O43541 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SMAD6O43541 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.85□□□□□ -1.63
SMAD6O43541 RPA2P2-201ENST00000419698 796 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 AC093084.1-201ENST00000424233 687 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 MTCO1P45-201ENST00000431457 267 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 AL451139.1-201ENST00000434718 346 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 RPS20P1-201ENST00000434853 354 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.85□□□□□ -1.63
SMAD6O43541 ARL5AP3-201ENST00000439327 386 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.85□□□□□ -1.63
SMAD6O43541 AC073264.2-201ENST00000448886 166 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 ZNF886P-201ENST00000450781 723 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.85□□□□□ -1.63
SMAD6O43541 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.85□□□□□ -1.63
SMAD6O43541 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.85□□□□□ -1.63
SMAD6O43541 AC006967.1-201ENST00000467608 589 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 OR2A20P-203ENST00000498397 1268 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.85□□□□□ -1.63
SMAD6O43541 AC118282.2-201ENST00000508739 374 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 HPRT1P1-201ENST00000509498 657 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 RNU2-30P-201ENST00000516209 141 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.85□□□□□ -1.63
SMAD6O43541 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.85□□□□□ -1.63
SMAD6O43541 OR5M2P-201ENST00000529003 936 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 AP006289.1-201ENST00000538089 277 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.85□□□□□ -1.63
SMAD6O43541 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SMAD6O43541 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SMAD6O43541 AL390726.5-202ENST00000564800 256 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 AC109446.2-201ENST00000567872 497 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 MIR4472-2-201ENST00000582069 67 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
SMAD6O43541 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.85□□□□□ -1.63
SMAD6O43541 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 AC087752.4-201ENST00000605911 462 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 MIR6820-201ENST00000611508 62 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.85□□□□□ -1.63
SMAD6O43541 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.85□□□□□ -1.63
SMAD6O43541 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.85□□□□□ -1.63
SMAD6O43541 AC083865.1-201ENST00000636634 831 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SMAD6O43541 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.85□□□□□ -1.63
SMAD6O43541 MFSD8-216ENST00000641147 4009 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SMAD6O43541 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.85□□□□□ -1.63
SMAD6O43541 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SMAD6O43541 UGT2B26P-201ENST00000508672 1613 ntBASIC4.85□□□□□ -1.63
SMAD6O43541 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SMAD6O43541 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SMAD6O43541 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SMAD6O43541 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
SMAD6O43541 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SMAD6O43541 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SMAD6O43541 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
SMAD6O43541 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SMAD6O43541 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SMAD6O43541 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SMAD6O43541 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SMAD6O43541 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SMAD6O43541 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SMAD6O43541 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SMAD6O43541 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SMAD6O43541 AC000374.1-201ENST00000434698 1745 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SMAD6O43541 RAD1P1-201ENST00000231383 813 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SMAD6O43541 AC079741.1-201ENST00000321498 212 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 RN7SKP115-201ENST00000363177 317 ntBASIC4.84□□□□□ -1.63
SMAD6O43541 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SMAD6O43541 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms