Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RIPK2O43353 RNU6-889P-201ENST00000517189 103 ntBASIC4.39□□□□□ -1.71
RIPK2O43353 IGKV2-36-201ENST00000519999 223 ntBASIC4.39□□□□□ -1.71
RIPK2O43353 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.39□□□□□ -1.71
RIPK2O43353 AC027176.2-201ENST00000559166 746 ntBASIC4.39□□□□□ -1.71
RIPK2O43353 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.39□□□□□ -1.71
RIPK2O43353 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.39□□□□□ -1.71
RIPK2O43353 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.39□□□□□ -1.71
RIPK2O43353 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RIPK2O43353 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.39□□□□□ -1.71
RIPK2O43353 LINC00216-201ENST00000623548 1126 ntBASIC4.39□□□□□ -1.71
RIPK2O43353 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.39□□□□□ -1.71
RIPK2O43353 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.39□□□□□ -1.71
RIPK2O43353 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RIPK2O43353 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.39□□□□□ -1.71
RIPK2O43353 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RIPK2O43353 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
RIPK2O43353 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.39□□□□□ -1.71
RIPK2O43353 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RIPK2O43353 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RIPK2O43353 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
RIPK2O43353 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.38□□□□□ -1.71
RIPK2O43353 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIPK2O43353 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIPK2O43353 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RIPK2O43353 AC053481.2-202ENST00000582394 1500 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 AL356489.2-201ENST00000566968 3528 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 RN7SKP149-201ENST00000363008 344 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 RN7SKP269-201ENST00000365545 319 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 SNORA51.8-201ENST00000384234 132 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 CCNB2P1-201ENST00000399411 1150 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RIPK2O43353 RN7SKP213-201ENST00000410746 298 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 RPL31P45-201ENST00000419532 356 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 AL139095.3-201ENST00000419672 1203 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 MTND2P11-201ENST00000423638 648 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.38□□□□□ -1.71
RIPK2O43353 FTH1P6-201ENST00000430768 320 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.38□□□□□ -1.71
RIPK2O43353 AL353093.1-201ENST00000441292 436 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 RPL31P44-201ENST00000447680 377 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.38□□□□□ -1.71
RIPK2O43353 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.38□□□□□ -1.71
RIPK2O43353 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.38□□□□□ -1.71
RIPK2O43353 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.38□□□□□ -1.71
RIPK2O43353 OR5BC1P-201ENST00000529327 739 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.38□□□□□ -1.71
RIPK2O43353 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.38□□□□□ -1.71
RIPK2O43353 AL031320.1-201ENST00000604177 357 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 AP003117.2-201ENST00000606010 545 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 AC245389.2-201ENST00000616023 576 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 AC243756.2-201ENST00000618406 463 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 AC242843.1-201ENST00000618702 573 ntBASIC4.38□□□□□ -1.71
RIPK2O43353 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.38□□□□□ -1.71
RIPK2O43353 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIPK2O43353 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIPK2O43353 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RIPK2O43353 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.38□□□□□ -1.71
RIPK2O43353 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RIPK2O43353 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RIPK2O43353 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RIPK2O43353 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RIPK2O43353 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RIPK2O43353 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
RIPK2O43353 AC027290.2-201ENST00000623210 18662 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 MIR3065-201ENST00000390137 79 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 AP000357.1-201ENST00000409926 1165 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 RANP4-201ENST00000413361 655 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 SNRPFP1-201ENST00000414761 252 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 LINC01881-201ENST00000416103 412 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 AC079355.1-201ENST00000421770 223 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.37□□□□□ -1.71
RIPK2O43353 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.37□□□□□ -1.71
RIPK2O43353 AC105402.2-201ENST00000438503 358 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.37□□□□□ -1.71
RIPK2O43353 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.37□□□□□ -1.71
RIPK2O43353 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RIPK2O43353 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.37□□□□□ -1.71
RIPK2O43353 SNORD108-201ENST00000459332 71 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 AC090543.1-201ENST00000492168 485 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 RN7SL812P-201ENST00000493791 279 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.37□□□□□ -1.71
RIPK2O43353 AC006064.5-201ENST00000541782 248 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RIPK2O43353 AL109766.1-201ENST00000555080 552 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.37□□□□□ -1.71
RIPK2O43353 AC079587.1-201ENST00000603846 277 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 AL139286.1-201ENST00000604465 483 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 AC105429.2-201ENST00000610567 517 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 MIR6768-201ENST00000610734 72 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 U6.48-201ENST00000618523 106 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
RIPK2O43353 ZNF33CP-201ENST00000432492 2030 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RIPK2O43353 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.37□□□□□ -1.71
RIPK2O43353 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RIPK2O43353 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RIPK2O43353 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.37□□□□□ -1.71
RIPK2O43353 AL049737.1-201ENST00000413920 1403 ntBASIC4.37□□□□□ -1.71
RIPK2O43353 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms