Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PHGDHO43175 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.2□□□□□ -1.58
PHGDHO43175 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PHGDHO43175 MUC2-202ENST00000613187 4845 ntBASIC5.2□□□□□ -1.58
PHGDHO43175 AC090017.1-201ENST00000548612 1779 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
PHGDHO43175 AP000526.1-201ENST00000603308 1388 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHGDHO43175 AC006210.2-201ENST00000367074 1545 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PHGDHO43175 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHGDHO43175 TMSB4XP4-201ENST00000323496 618 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 RNU6-115P-201ENST00000364310 107 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 SUGT1P1-201ENST00000379514 476 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.19□□□□□ -1.58
PHGDHO43175 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.19□□□□□ -1.58
PHGDHO43175 RNU1-77P-201ENST00000390868 162 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 AP000534.2-201ENST00000412729 568 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.19□□□□□ -1.58
PHGDHO43175 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.19□□□□□ -1.58
PHGDHO43175 AC004074.1-201ENST00000421810 1063 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.19□□□□□ -1.58
PHGDHO43175 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.19□□□□□ -1.58
PHGDHO43175 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC5.19□□□□□ -1.58
PHGDHO43175 UBE2V1P1-201ENST00000430836 445 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.19□□□□□ -1.58
PHGDHO43175 GAPDHP58-201ENST00000438477 1006 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PHGDHO43175 AC100832.1-201ENST00000471945 383 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 ACTG1P13-201ENST00000486987 1043 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.19□□□□□ -1.58
PHGDHO43175 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PHGDHO43175 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.19□□□□□ -1.58
PHGDHO43175 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.19□□□□□ -1.58
PHGDHO43175 RN7SKP96-201ENST00000516948 297 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 RNA5SP373-201ENST00000517271 95 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.19□□□□□ -1.58
PHGDHO43175 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.19□□□□□ -1.58
PHGDHO43175 AC027544.3-201ENST00000535082 757 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.19□□□□□ -1.58
PHGDHO43175 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.19□□□□□ -1.58
PHGDHO43175 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.19□□□□□ -1.58
PHGDHO43175 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.19□□□□□ -1.58
PHGDHO43175 RPL10P14-201ENST00000565265 298 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.19□□□□□ -1.58
PHGDHO43175 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.19□□□□□ -1.58
PHGDHO43175 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.19□□□□□ -1.58
PHGDHO43175 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.19□□□□□ -1.58
PHGDHO43175 AL592221.1-201ENST00000605266 382 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 AC080013.6-201ENST00000606185 215 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.19□□□□□ -1.58
PHGDHO43175 AC243756.2-201ENST00000618406 463 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHGDHO43175 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PHGDHO43175 AC004943.3-201ENST00000624116 600 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 MKKS-204ENST00000639674 192 ntBASIC5.19□□□□□ -1.58
PHGDHO43175 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHGDHO43175 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
PHGDHO43175 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHGDHO43175 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHGDHO43175 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PHGDHO43175 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
PHGDHO43175 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.19□□□□□ -1.58
PHGDHO43175 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PHGDHO43175 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHGDHO43175 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
PHGDHO43175 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHGDHO43175 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.18□□□□□ -1.58
PHGDHO43175 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHGDHO43175 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
PHGDHO43175 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PHGDHO43175 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHGDHO43175 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHGDHO43175 RN7SKP15-201ENST00000364742 309 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.18□□□□□ -1.58
PHGDHO43175 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHGDHO43175 MIR1302-8-201ENST00000408342 128 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 SDHDP6-201ENST00000414693 480 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.18□□□□□ -1.58
PHGDHO43175 AC233981.1-201ENST00000423224 461 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.18□□□□□ -1.58
PHGDHO43175 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.18□□□□□ -1.58
PHGDHO43175 AC005345.1-201ENST00000431868 217 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
PHGDHO43175 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.18□□□□□ -1.58
PHGDHO43175 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.18□□□□□ -1.58
PHGDHO43175 BX842559.2-201ENST00000451418 605 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 AC144530.1-201ENST00000452862 555 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 RN7SL273P-201ENST00000481561 299 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 RN7SL809P-201ENST00000482040 297 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.18□□□□□ -1.58
PHGDHO43175 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.18□□□□□ -1.58
PHGDHO43175 AC025674.1-201ENST00000507074 324 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.18□□□□□ -1.58
PHGDHO43175 RNU6-488P-201ENST00000515918 99 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.18□□□□□ -1.58
PHGDHO43175 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.18□□□□□ -1.58
PHGDHO43175 UBE2NP1-201ENST00000545592 458 ntBASIC5.18□□□□□ -1.58
PHGDHO43175 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.18□□□□□ -1.58
PHGDHO43175 AC138915.2-201ENST00000569776 97 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms