Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AL355480.4-201ENST00000626823 69 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 DDX10P2-201ENST00000417796 2614 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC011008.2-201ENST00000624866 3352 ntBASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VPS9D1Q9Y2B5 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AC027287.1-201ENST00000553115 1453 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AC125603.4-201ENST00000621942 2699 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 Y_RNA.126-201ENST00000363382 111 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 SNORA3.1-201ENST00000408166 111 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 Z99755.1-201ENST00000414048 380 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AL451074.4-201ENST00000447545 470 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 FCF1P4-201ENST00000448326 183 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 RN7SKP82-201ENST00000516786 223 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AC104211.2-201ENST00000521317 436 ntTSL 5 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AC008083.2-201ENST00000546707 476 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AL121820.1-201ENST00000556919 461 ntTSL 5 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 MIR5192-201ENST00000579892 92 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AP001823.1-201ENST00000604056 1003 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AC122710.3-201ENST00000606566 541 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AP004247.4-201ENST00000608484 942 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AC021753.1-201ENST00000635724 168 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 U6.114-201ENST00000636407 96 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 FLJ42393-201ENST00000623801 2270 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AL096816.1-201ENST00000623300 2920 ntBASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.36□□□□□ -1.23
VPS9D1Q9Y2B5 HDAC1P1-201ENST00000455482 1445 ntBASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 AP003119.3-201ENST00000566747 4192 ntBASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 NBPF8-201ENST00000583271 5330 ntBASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 AC003973.3-201ENST00000624863 2822 ntBASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 CDY18P-201ENST00000438294 1609 ntBASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 AL121886.1-201ENST00000358609 435 ntBASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 RNA5SP301-201ENST00000362537 121 ntBASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 RN7SKP63-201ENST00000363187 301 ntBASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 RN7SKP211-201ENST00000363328 315 ntBASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 RNU6-641P-201ENST00000384006 107 ntBASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 MIR181C-201ENST00000384881 110 ntBASIC7.35□□□□□ -1.23
VPS9D1Q9Y2B5 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms