Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC006042.3-201ENST00000454684 1469 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC012618.3-205ENST00000637896 1496 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 RNU6-1339P-201ENST00000363574 91 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 RNA5SP335-201ENST00000363817 110 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC211486.3-201ENST00000412694 621 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 MTND4P22-201ENST00000413116 1169 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 RPL26P29-201ENST00000415623 438 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC245028.1-201ENST00000423259 256 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AL008629.1-201ENST00000438615 184 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC105399.1-202ENST00000447303 205 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC079168.1-201ENST00000458741 345 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 RPL23AP37-201ENST00000479658 549 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 RNU6-1129P-201ENST00000515964 104 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC100784.1-201ENST00000522790 310 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 HMGB1P40-201ENST00000525121 540 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 MTCYBP27-201ENST00000555160 670 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 VN1R88P-201ENST00000596787 292 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC087283.1-201ENST00000604029 1074 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC021749.1-201ENST00000604322 607 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 TUSC7.1-201ENST00000610969 165 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AL121890.2-201ENST00000617644 465 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AP000346.3-201ENST00000622821 210 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC091953.3-201ENST00000623220 236 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 AC068137.4-201ENST00000638485 296 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 CASC19-221ENST00000641309 1382 ntBASIC5.03□□□□□ -1.6
VPS4AQ9UN37 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
VPS4AQ9UN37 PANDAR-201ENST00000629595 1506 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 AC000123.3-201ENST00000624029 4975 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 snoZ40.1-201ENST00000364540 72 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 SNORA62.2-201ENST00000364672 152 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 RNU5A-2P-201ENST00000384337 116 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 U3.36-201ENST00000408418 213 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 RNU6-77P-201ENST00000410554 91 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 RNU6-575P-201ENST00000411326 105 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 MTND2P18-201ENST00000419962 1030 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 HMGB1P45-201ENST00000435986 653 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 COX7BP2-201ENST00000437976 242 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 AP000936.3-201ENST00000438127 255 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 GSTA7P-201ENST00000438425 448 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 RPS26P30-201ENST00000443431 335 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 GAPDHP25-201ENST00000447061 1001 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 AC007327.1-201ENST00000447461 264 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 NPM1P39-201ENST00000449818 867 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 ART2BP-201ENST00000453501 499 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS4AQ9UN37 AL035090.1-201ENST00000454835 332 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 AL133244.1-201ENST00000456007 258 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 AC245028.2-201ENST00000458673 253 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 RN7SL738P-201ENST00000470264 297 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 AC104687.1-201ENST00000485829 412 ntBASIC5.02□□□□□ -1.61
VPS4AQ9UN37 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms