Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 RNU6-609P-201ENST00000365459 107 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HACD3Q9P035 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HACD3Q9P035 GSTM3P2-201ENST00000412746 530 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 AC019050.1-201ENST00000418508 492 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 UQCRBP1-201ENST00000421129 336 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.54□□□□□ -1.68
HACD3Q9P035 RPS12P10-201ENST00000427031 377 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.54□□□□□ -1.68
HACD3Q9P035 AC069285.2-201ENST00000440210 275 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 RPL23AP93-201ENST00000440847 484 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HACD3Q9P035 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.54□□□□□ -1.68
HACD3Q9P035 AC012671.1-201ENST00000451912 203 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 RPL7AP52-201ENST00000458096 790 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.54□□□□□ -1.68
HACD3Q9P035 NPM1P17-201ENST00000479221 602 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.54□□□□□ -1.68
HACD3Q9P035 CDH12P2-201ENST00000504393 298 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 RNA5SP497-201ENST00000516081 97 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.54□□□□□ -1.68
HACD3Q9P035 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.54□□□□□ -1.68
HACD3Q9P035 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.54□□□□□ -1.68
HACD3Q9P035 AP001781.1-201ENST00000530977 207 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.54□□□□□ -1.68
HACD3Q9P035 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.54□□□□□ -1.68
HACD3Q9P035 AC008536.1-201ENST00000602872 669 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.54□□□□□ -1.68
HACD3Q9P035 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HACD3Q9P035 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HACD3Q9P035 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HACD3Q9P035 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.54□□□□□ -1.68
HACD3Q9P035 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.54□□□□□ -1.68
HACD3Q9P035 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.54□□□□□ -1.68
HACD3Q9P035 AC012020.1-201ENST00000624541 1728 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HACD3Q9P035 AC097504.1-201ENST00000515103 2415 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 AC011266.1-201ENST00000624119 3569 ntBASIC4.54□□□□□ -1.68
HACD3Q9P035 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HACD3Q9P035 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
HACD3Q9P035 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.53□□□□□ -1.68
HACD3Q9P035 OR56B2P-202ENST00000641377 2453 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
HACD3Q9P035 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HACD3Q9P035 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HACD3Q9P035 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HACD3Q9P035 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HACD3Q9P035 AC139769.1-204ENST00000472297 1931 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 AC103591.2-201ENST00000265259 766 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HACD3Q9P035 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HACD3Q9P035 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.53□□□□□ -1.68
HACD3Q9P035 AC119751.6-201ENST00000416712 186 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 SKP1P3-201ENST00000429280 487 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 AL138878.2-201ENST00000440581 1241 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.53□□□□□ -1.68
HACD3Q9P035 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.53□□□□□ -1.68
HACD3Q9P035 AC133473.1-201ENST00000455173 299 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 MTND2P39-201ENST00000457230 764 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 AC010469.1-201ENST00000463864 576 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.53□□□□□ -1.68
HACD3Q9P035 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.53□□□□□ -1.68
HACD3Q9P035 HMGN1P15-201ENST00000513870 295 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 RNA5SP154-201ENST00000516193 111 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.53□□□□□ -1.68
HACD3Q9P035 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.53□□□□□ -1.68
HACD3Q9P035 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.53□□□□□ -1.68
HACD3Q9P035 OSBPL9P3-201ENST00000534523 595 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.53□□□□□ -1.68
HACD3Q9P035 CBX3P2-202ENST00000583365 535 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 OR1AB1P-201ENST00000585564 761 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.53□□□□□ -1.68
HACD3Q9P035 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.53□□□□□ -1.68
HACD3Q9P035 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.53□□□□□ -1.68
HACD3Q9P035 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.53□□□□□ -1.68
HACD3Q9P035 AC100847.1-201ENST00000611316 481 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 AL353726.1-201ENST00000614041 1000 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 AP005019.3-201ENST00000620418 560 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 AC095038.2-201ENST00000621464 1070 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 AC073342.3-201ENST00000624211 193 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 AL049536.1-201ENST00000625043 744 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 AC006065.6-201ENST00000625201 545 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.53□□□□□ -1.68
HACD3Q9P035 FRG1DP-201ENST00000635586 771 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 AC007342.7-201ENST00000624610 2337 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 AC012618.3-205ENST00000637896 1496 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.53□□□□□ -1.68
HACD3Q9P035 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HACD3Q9P035 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HACD3Q9P035 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HACD3Q9P035 AL592148.3-201ENST00000608771 2646 ntBASIC4.53□□□□□ -1.68
HACD3Q9P035 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.69
HACD3Q9P035 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HACD3Q9P035 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.52□□□□□ -1.69
HACD3Q9P035 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HACD3Q9P035 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.52□□□□□ -1.69
HACD3Q9P035 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HACD3Q9P035 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.52□□□□□ -1.69
HACD3Q9P035 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms