Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AP002360.3-201ENST00000607673 710 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AL136981.2-201ENST00000617319 734 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AC090527.3-201ENST00000619041 548 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AC099654.12-201ENST00000639868 649 ntBASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDLIM7Q9NR12 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 RNU1-149P-201ENST00000390870 161 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC013442.1-201ENST00000397347 228 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AL034374.1-201ENST00000406329 351 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 RPS15AP38-201ENST00000413110 372 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 RPSAP35-201ENST00000413753 818 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 VTA1P1-201ENST00000414044 866 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC004448.2-201ENST00000422360 586 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 IPMKP1-201ENST00000425988 855 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AL590399.4-201ENST00000436561 601 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 PSAT1P4-201ENST00000466500 526 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 RN7SL738P-201ENST00000470264 297 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 CDH12P2-201ENST00000504393 298 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 RN7SKP147-201ENST00000517154 244 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AL358913.1-201ENST00000554342 121 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 RPS3AP4-201ENST00000555161 764 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC127381.1-201ENST00000555979 939 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 RPL10P14-201ENST00000565265 298 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC092325.1-201ENST00000566449 554 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC012417.1-201ENST00000582307 1039 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 CYP4F35P-202ENST00000636121 390 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC119674.1-212ENST00000641155 993 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 AC068870.3-201ENST00000625077 2536 ntBASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDLIM7Q9NR12 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 AC097461.1-201ENST00000568928 2821 ntBASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 ENSAP3-201ENST00000312710 333 ntBASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 RNU6-543P-201ENST00000362576 108 ntBASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 SNORA51.8-201ENST00000384234 132 ntBASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 RNY3P10-201ENST00000384764 102 ntBASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 AL133388.1-201ENST00000404509 287 ntBASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDLIM7Q9NR12 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms