Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
TRIM2Q9C040 AC011626.1-201ENST00000604710 562 ntBASIC4.84□□□□□ -1.63
TRIM2Q9C040 MIR6719-201ENST00000622428 87 ntBASIC4.84□□□□□ -1.63
TRIM2Q9C040 AC092608.3-201ENST00000625017 386 ntBASIC4.84□□□□□ -1.63
TRIM2Q9C040 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM2Q9C040 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM2Q9C040 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM2Q9C040 AC103706.2-201ENST00000638080 240 ntBASIC4.84□□□□□ -1.63
TRIM2Q9C040 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
TRIM2Q9C040 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM2Q9C040 AL034549.2-201ENST00000618285 3373 ntBASIC4.84□□□□□ -1.63
TRIM2Q9C040 AP000756.2-201ENST00000624168 2567 ntBASIC4.84□□□□□ -1.64
TRIM2Q9C040 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TRIM2Q9C040 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
TRIM2Q9C040 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
TRIM2Q9C040 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TRIM2Q9C040 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TRIM2Q9C040 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM2Q9C040 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM2Q9C040 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 AC006210.2-201ENST00000367074 1545 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM2Q9C040 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 MAPK10-328ENST00000641553 4009 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM2Q9C040 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM2Q9C040 RNA5SP335-201ENST00000363817 110 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 SNORD116-1-201ENST00000384335 95 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 ATP5F1P3-201ENST00000397213 657 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 RNU4-72P-201ENST00000410754 173 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 MTCO1P3-201ENST00000429327 192 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 AL627308.1-201ENST00000435693 821 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 CYCSP12-201ENST00000437729 300 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 NPM1P33-201ENST00000438918 872 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 AL445567.1-201ENST00000439121 144 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 AL357520.1-201ENST00000441557 453 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 TPTE2P6-202ENST00000445572 1007 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 HMGB1P16-201ENST00000447155 540 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 NOP56P2-201ENST00000447491 769 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 HMGB1P4-201ENST00000455362 567 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 UBA52P7-201ENST00000486088 380 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 MYL12BP2-201ENST00000503948 512 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 OR5H4P-201ENST00000510851 923 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 NDUFB4P12-201ENST00000513465 390 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 AC006427.1-201ENST00000514359 712 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 AC010306.1-201ENST00000523223 1117 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM2Q9C040 AP003461.1-201ENST00000528866 78 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 GCSHP4-201ENST00000538792 439 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 AC022884.2-201ENST00000578535 580 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 RN7SL708P-201ENST00000580952 299 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 VN1R88P-201ENST00000596787 292 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 AL392048.1-201ENST00000613946 534 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 ATE1-AS1-202ENST00000636460 506 ntBASIC4.83□□□□□ -1.64
TRIM2Q9C040 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM2Q9C040 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM2Q9C040 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM2Q9C040 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TRIM2Q9C040 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM2Q9C040 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM2Q9C040 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM2Q9C040 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TRIM2Q9C040 MAPK10-304ENST00000641341 3984 ntBASIC4.82□□□□□ -1.64
TRIM2Q9C040 AL590763.1-201ENST00000398297 1545 ntBASIC4.82□□□□□ -1.64
TRIM2Q9C040 AL451142.2-201ENST00000429076 2090 ntBASIC4.82□□□□□ -1.64
TRIM2Q9C040 CASC19-204ENST00000641001 2055 ntBASIC4.82□□□□□ -1.64
TRIM2Q9C040 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM2Q9C040 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM2Q9C040 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM2Q9C040 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TRIM2Q9C040 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM2Q9C040 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM2Q9C040 FAM3C2-201ENST00000312214 681 ntBASIC4.82□□□□□ -1.64
TRIM2Q9C040 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM2Q9C040 RNU4-4P-201ENST00000364588 130 ntBASIC4.82□□□□□ -1.64
TRIM2Q9C040 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TRIM2Q9C040 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM2Q9C040 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TRIM2Q9C040 RNU6-171P-201ENST00000384354 107 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms