Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC109471.1-201ENST00000511631 612 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 OR4A43P-201ENST00000532938 908 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC107294.1-201ENST00000609524 467 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC000403.1-201ENST00000613696 3585 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC079248.2-201ENST00000623779 326 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC106730.3-201ENST00000624568 641 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC097655.1-201ENST00000635075 318 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 PCYT1A-201ENST00000292823 5597 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 SNORA63C-201ENST00000364578 129 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 RNU4-17P-201ENST00000365598 141 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 MIR433-201ENST00000384837 93 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 SNORA12.1-201ENST00000390873 148 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AL713922.1-201ENST00000416477 747 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 HMGN1P8-201ENST00000463578 288 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC055733.3-201ENST00000505214 523 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 RNA5SP395-201ENST00000516567 118 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AL583832.1-201ENST00000603227 784 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC124303.1-201ENST00000605703 360 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AL133255.1-201ENST00000606374 441 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AL591516.1-201ENST00000611326 274 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC138932.5-201ENST00000617759 563 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 OR1N1-202ENST00000619659 939 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC090617.10-201ENST00000624308 134 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 CTNNA1P1-201ENST00000515849 2728 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AGPAT4-203ENST00000366911 7705 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 DSTYK-201ENST00000367161 7739 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 RNU6-1287P-201ENST00000362914 107 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 RNU6-153P-201ENST00000364422 104 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 RNU6-1062P-201ENST00000383908 107 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 RNA5SP225-201ENST00000410874 135 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 MTND4P28-201ENST00000426217 387 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 ERLEC1P1-201ENST00000433806 578 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC073052.1-201ENST00000440417 714 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC089999.1-201ENST00000460336 374 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 GLRXP3-201ENST00000470810 321 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 RPS4XP23-201ENST00000487801 237 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 MTND2P31-201ENST00000512602 616 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC008147.3-201ENST00000548666 354 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 CYP4A44P-201ENST00000569984 154 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC009220.3-201ENST00000604318 586 ntBASIC1.73□□□□□ -2.13
HMCN1Q96RW7 AC097505.1-201ENST00000610199 565 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms