Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SNIP1Q8TAD8 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SNIP1Q8TAD8 AC011416.1-201ENST00000514947 1732 ntBASIC6.78□□□□□ -1.32
SNIP1Q8TAD8 AC005034.3-201ENST00000604845 1747 ntBASIC6.78□□□□□ -1.32
SNIP1Q8TAD8 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SNIP1Q8TAD8 CTAGE3P-201ENST00000454280 2404 ntBASIC6.78□□□□□ -1.32
SNIP1Q8TAD8 AL139805.2-201ENST00000455305 2433 ntBASIC6.78□□□□□ -1.32
SNIP1Q8TAD8 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC6.78□□□□□ -1.32
SNIP1Q8TAD8 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SNIP1Q8TAD8 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SNIP1Q8TAD8 GANC-206ENST00000566442 2512 ntTSL 2 BASIC6.78□□□□□ -1.32
SNIP1Q8TAD8 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SNIP1Q8TAD8 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SNIP1Q8TAD8 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SNIP1Q8TAD8 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.32
SNIP1Q8TAD8 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.77□□□□□ -1.32
SNIP1Q8TAD8 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.32
SNIP1Q8TAD8 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 RNU6-251P-201ENST00000363235 104 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 Y_RNA.212-201ENST00000364177 102 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 Y_RNA.270-201ENST00000364693 104 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 RNU1-115P-201ENST00000365329 160 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 Y_RNA.483-201ENST00000384380 101 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 RPL7P60-201ENST00000397636 735 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AL359715.1-201ENST00000404330 555 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 RNA5SP155-201ENST00000411154 129 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 RPS15AP10-201ENST00000432472 382 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AC092106.2-201ENST00000436597 487 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AL645936.1-201ENST00000441979 518 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 MED28P3-201ENST00000444288 531 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 UOX-201ENST00000471089 899 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 FO393415.2-201ENST00000480085 343 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 RN7SKP11-201ENST00000517018 287 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 HIGD1AP6-201ENST00000521833 279 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AP001804.2-201ENST00000533932 910 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 HMGB3P26-201ENST00000560051 582 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 MIR3154-201ENST00000577829 84 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AC015818.6-201ENST00000584274 634 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AC092447.9-201ENST00000603395 144 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 RNF138P2-201ENST00000603490 592 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 Z82243.1-201ENST00000609432 473 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 MRPL57P3-201ENST00000619218 176 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AC011471.4-201ENST00000638271 216 ntBASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC6.77□□□□□ -1.33
SNIP1Q8TAD8 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNIP1Q8TAD8 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SNIP1Q8TAD8 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNIP1Q8TAD8 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SNIP1Q8TAD8 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.76□□□□□ -1.33
SNIP1Q8TAD8 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC6.76□□□□□ -1.33
SNIP1Q8TAD8 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
SNIP1Q8TAD8 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SNIP1Q8TAD8 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC6.76□□□□□ -1.33
SNIP1Q8TAD8 AL162171.3-201ENST00000617439 3178 ntBASIC6.76□□□□□ -1.33
SNIP1Q8TAD8 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms