Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USF2Q15853 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USF2Q15853 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.68□□□□□ -1.82
USF2Q15853 RNU2-37P-201ENST00000410695 177 ntBASIC3.68□□□□□ -1.82
USF2Q15853 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.68□□□□□ -1.82
USF2Q15853 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.68□□□□□ -1.82
USF2Q15853 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.68□□□□□ -1.82
USF2Q15853 ELOCP18-201ENST00000434209 337 ntBASIC3.68□□□□□ -1.82
USF2Q15853 AC092647.3-201ENST00000443044 633 ntBASIC3.68□□□□□ -1.82
USF2Q15853 AC005532.2-201ENST00000467154 373 ntBASIC3.68□□□□□ -1.82
USF2Q15853 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.68□□□□□ -1.82
USF2Q15853 AC109462.1-201ENST00000491087 368 ntBASIC3.68□□□□□ -1.82
USF2Q15853 AC008953.1-201ENST00000497334 318 ntBASIC3.68□□□□□ -1.82
USF2Q15853 AC108145.1-201ENST00000503770 153 ntBASIC3.68□□□□□ -1.82
USF2Q15853 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.68□□□□□ -1.82
USF2Q15853 AC093763.2-201ENST00000505334 1223 ntBASIC3.68□□□□□ -1.82
USF2Q15853 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.68□□□□□ -1.82
USF2Q15853 AC090071.1-201ENST00000507713 644 ntBASIC3.68□□□□□ -1.82
USF2Q15853 AC108120.2-201ENST00000512973 294 ntBASIC3.68□□□□□ -1.82
USF2Q15853 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.68□□□□□ -1.82
USF2Q15853 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.68□□□□□ -1.82
USF2Q15853 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.68□□□□□ -1.82
USF2Q15853 MTND5P21-201ENST00000531961 522 ntBASIC3.68□□□□□ -1.82
USF2Q15853 AP004242.1-201ENST00000533701 349 ntBASIC3.68□□□□□ -1.82
USF2Q15853 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
USF2Q15853 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC3.68□□□□□ -1.82
USF2Q15853 ADAD1P2-201ENST00000588476 646 ntBASIC3.68□□□□□ -1.82
USF2Q15853 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.68□□□□□ -1.82
USF2Q15853 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.68□□□□□ -1.82
USF2Q15853 AC020910.2-201ENST00000603635 610 ntBASIC3.68□□□□□ -1.82
USF2Q15853 AC020910.3-201ENST00000603701 874 ntBASIC3.68□□□□□ -1.82
USF2Q15853 AC016769.4-201ENST00000616893 535 ntBASIC3.68□□□□□ -1.82
USF2Q15853 CR381572.2-201ENST00000624852 397 ntBASIC3.68□□□□□ -1.82
USF2Q15853 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.68□□□□□ -1.82
USF2Q15853 MIR4278-201ENST00000636094 69 ntBASIC3.68□□□□□ -1.82
USF2Q15853 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
USF2Q15853 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USF2Q15853 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USF2Q15853 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
USF2Q15853 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
USF2Q15853 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USF2Q15853 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.68□□□□□ -1.82
USF2Q15853 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
USF2Q15853 USP8P1-201ENST00000494673 3183 ntBASIC3.67□□□□□ -1.82
USF2Q15853 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.67□□□□□ -1.82
USF2Q15853 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
USF2Q15853 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
USF2Q15853 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.67□□□□□ -1.82
USF2Q15853 EIF2AP4-201ENST00000424793 1781 ntBASIC3.67□□□□□ -1.82
USF2Q15853 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
USF2Q15853 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USF2Q15853 RNU4-4P-201ENST00000364588 130 ntBASIC3.67□□□□□ -1.82
USF2Q15853 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
USF2Q15853 RNU6-328P-201ENST00000390887 106 ntBASIC3.67□□□□□ -1.82
USF2Q15853 U3.30-201ENST00000391308 210 ntBASIC3.67□□□□□ -1.82
USF2Q15853 MIR921-201ENST00000401133 56 ntBASIC3.67□□□□□ -1.82
USF2Q15853 RN7SKP213-201ENST00000410746 298 ntBASIC3.67□□□□□ -1.82
USF2Q15853 OR2AM1P-201ENST00000422137 422 ntBASIC3.67□□□□□ -1.82
USF2Q15853 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.67□□□□□ -1.82
USF2Q15853 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.67□□□□□ -1.82
USF2Q15853 MTND2P11-201ENST00000423638 648 ntBASIC3.67□□□□□ -1.82
USF2Q15853 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USF2Q15853 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USF2Q15853 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.67□□□□□ -1.82
USF2Q15853 CEACAMP7-201ENST00000444105 496 ntBASIC3.67□□□□□ -1.82
USF2Q15853 EEF1B2P5-201ENST00000444820 548 ntBASIC3.67□□□□□ -1.82
USF2Q15853 AL627224.1-201ENST00000448334 444 ntBASIC3.67□□□□□ -1.82
USF2Q15853 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.67□□□□□ -1.82
USF2Q15853 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.67□□□□□ -1.82
USF2Q15853 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.67□□□□□ -1.82
USF2Q15853 OR5D15P-201ENST00000531671 942 ntBASIC3.67□□□□□ -1.82
USF2Q15853 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.67□□□□□ -1.82
USF2Q15853 HMGN2P6-201ENST00000551091 273 ntBASIC3.67□□□□□ -1.82
USF2Q15853 RN7SL802P-201ENST00000577858 299 ntBASIC3.67□□□□□ -1.82
USF2Q15853 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.67□□□□□ -1.82
USF2Q15853 AC011453.2-201ENST00000603737 729 ntBASIC3.67□□□□□ -1.82
USF2Q15853 RNA5SP108-201ENST00000605921 117 ntBASIC3.67□□□□□ -1.82
USF2Q15853 AL021707.7-201ENST00000607991 416 ntBASIC3.67□□□□□ -1.82
USF2Q15853 AP001521.2-201ENST00000608772 546 ntBASIC3.67□□□□□ -1.82
USF2Q15853 AC007497.1-201ENST00000610421 561 ntBASIC3.67□□□□□ -1.82
USF2Q15853 AC018445.2-201ENST00000622987 260 ntBASIC3.67□□□□□ -1.82
USF2Q15853 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC3.67□□□□□ -1.82
USF2Q15853 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USF2Q15853 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
USF2Q15853 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.67□□□□□ -1.82
USF2Q15853 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USF2Q15853 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.67□□□□□ -1.82
USF2Q15853 SAMMSON-226ENST00000642089 1582 ntBASIC3.67□□□□□ -1.82
USF2Q15853 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
USF2Q15853 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.66□□□□□ -1.82
USF2Q15853 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.66□□□□□ -1.82
USF2Q15853 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
USF2Q15853 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USF2Q15853 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
USF2Q15853 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
USF2Q15853 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USF2Q15853 AC018555.1-201ENST00000567548 1980 ntBASIC3.66□□□□□ -1.82
USF2Q15853 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
USF2Q15853 RN7SKP95-201ENST00000362860 303 ntBASIC3.66□□□□□ -1.82
USF2Q15853 RNU6-356P-201ENST00000384140 107 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms