Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH1Q08174 AC128677.1-201ENST00000436016 442 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH1Q08174 SEPT14P3-201ENST00000439401 183 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDH1Q08174 H3F3BP1-201ENST00000440551 403 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 AL732372.2-207ENST00000445840 183 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 MORF4-201ENST00000447135 971 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDH1Q08174 RPS23P9-201ENST00000448848 438 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 AC140076.1-201ENST00000449897 361 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 NIPA2P5-201ENST00000452282 464 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 SEPT14P2-201ENST00000453405 183 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 RNU7-136P-201ENST00000458819 69 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 RN7SL643P-201ENST00000471845 291 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 AC139783.2-201ENST00000504847 1145 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH1Q08174 SEPT14P4-201ENST00000513445 186 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC6.16□□□□□ -1.42
PCDH1Q08174 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDH1Q08174 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDH1Q08174 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDH1Q08174 FO082796.1-201ENST00000523795 183 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDH1Q08174 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.16□□□□□ -1.42
PCDH1Q08174 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDH1Q08174 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.16□□□□□ -1.42
PCDH1Q08174 SUB1P2-201ENST00000556401 297 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 MIR5186-201ENST00000577504 120 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 AC026898.1-201ENST00000586404 571 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDH1Q08174 AC018638.8-201ENST00000588755 281 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDH1Q08174 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.16□□□□□ -1.42
PCDH1Q08174 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDH1Q08174 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 AC073046.2-201ENST00000604756 527 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 COX6CP4-201ENST00000605798 228 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 RNU6-87P-201ENST00000607561 108 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 AL352984.2-202ENST00000613699 155 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
PCDH1Q08174 AL138693.1-201ENST00000622219 129 ntBASIC6.16□□□□□ -1.42
PCDH1Q08174 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH1Q08174 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH1Q08174 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDH1Q08174 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDH1Q08174 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
PCDH1Q08174 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PCDH1Q08174 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
PCDH1Q08174 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDH1Q08174 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDH1Q08174 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH1Q08174 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH1Q08174 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH1Q08174 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDH1Q08174 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDH1Q08174 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH1Q08174 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDH1Q08174 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH1Q08174 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDH1Q08174 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.15□□□□□ -1.42
PCDH1Q08174 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH1Q08174 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDH1Q08174 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH1Q08174 AC011369.2-201ENST00000624423 1567 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH1Q08174 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.15□□□□□ -1.42
PCDH1Q08174 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH1Q08174 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH1Q08174 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH1Q08174 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDH1Q08174 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
PCDH1Q08174 Y_RNA.166-201ENST00000363730 102 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 SNORA51.2-201ENST00000364595 132 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
PCDH1Q08174 RPS20P2-201ENST00000402520 389 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 RN7SKP221-201ENST00000410420 301 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 RNU2-8P-201ENST00000410727 190 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 OR9R1P-201ENST00000412200 877 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDH1Q08174 PRUNEP1-201ENST00000425846 705 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDH1Q08174 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDH1Q08174 AL645939.3-201ENST00000435408 225 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 AL590399.4-201ENST00000436561 601 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 RSU1P2-202ENST00000437884 485 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 CBX1P4-201ENST00000439415 457 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDH1Q08174 HMGN1P36-201ENST00000446623 298 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 AC073476.1-201ENST00000452854 407 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 AC005017.1-201ENST00000482002 490 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDH1Q08174 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDH1Q08174 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDH1Q08174 AP003181.2-201ENST00000528941 181 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDH1Q08174 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCDH1Q08174 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC6.15□□□□□ -1.42
PCDH1Q08174 AC009120.3-201ENST00000563335 499 ntBASIC6.15□□□□□ -1.42
PCDH1Q08174 AC037471.2-201ENST00000564941 598 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 576 ms