Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CL1P78423 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
CX3CL1P78423 AC234782.5-201ENST00000617723 324 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CL1P78423 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 AC099494.2-201ENST00000623371 978 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 PANDAR-201ENST00000629595 1506 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 AC090897.3-201ENST00000636973 1157 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 AC006927.4-201ENST00000639187 543 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 CASC19-221ENST00000641309 1382 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.08□□□□□ -1.76
CX3CL1P78423 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CX3CL1P78423 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CL1P78423 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.07□□□□□ -1.76
CX3CL1P78423 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CL1P78423 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CL1P78423 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CL1P78423 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CL1P78423 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 SMG1P6-201ENST00000532337 2930 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CL1P78423 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CL1P78423 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CX3CL1P78423 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CX3CL1P78423 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CX3CL1P78423 RN7SKP113-201ENST00000363891 295 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 snoZ40.1-201ENST00000364540 72 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 RNU6-146P-201ENST00000384602 108 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CX3CL1P78423 PRRC2CP1-201ENST00000404428 159 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 AL035079.1-201ENST00000405210 287 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CL1P78423 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CX3CL1P78423 AL355433.1-201ENST00000422804 300 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 XKRYP1-201ENST00000423438 492 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 XKRYP2-201ENST00000432915 492 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CL1P78423 RPL35AP21-201ENST00000437667 333 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.07□□□□□ -1.76
CX3CL1P78423 CNOT7P2-201ENST00000441051 832 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.07□□□□□ -1.76
CX3CL1P78423 HMGB1P16-201ENST00000447155 540 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.07□□□□□ -1.76
CX3CL1P78423 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.07□□□□□ -1.76
CX3CL1P78423 RN7SL443P-201ENST00000464331 290 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 PPIAP21-201ENST00000464473 501 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 RPS26P39-201ENST00000469206 341 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 AC126121.1-201ENST00000482313 553 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 AC084024.2-201ENST00000503480 791 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 AC113347.3-201ENST00000509113 148 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.07□□□□□ -1.76
CX3CL1P78423 RN7SKP287-201ENST00000516546 266 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.07□□□□□ -1.76
CX3CL1P78423 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.07□□□□□ -1.76
CX3CL1P78423 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CL1P78423 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.07□□□□□ -1.76
CX3CL1P78423 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.07□□□□□ -1.76
CX3CL1P78423 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.07□□□□□ -1.76
CX3CL1P78423 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.07□□□□□ -1.76
CX3CL1P78423 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.07□□□□□ -1.76
CX3CL1P78423 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CL1P78423 RN7SL753P-201ENST00000581238 290 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 AC008687.2-201ENST00000597865 520 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CL1P78423 AC022022.2-201ENST00000602989 360 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CL1P78423 AC093765.1-201ENST00000603758 881 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 AC069304.3-201ENST00000603938 1084 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 AL390816.3-201ENST00000604527 1066 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 AC093424.1-201ENST00000604999 338 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.07□□□□□ -1.76
CX3CL1P78423 AC016877.3-201ENST00000606778 504 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CX3CL1P78423 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CL1P78423 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CL1P78423 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CL1P78423 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CL1P78423 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CL1P78423 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CX3CL1P78423 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CL1P78423 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CL1P78423 AL450326.2-201ENST00000421913 1962 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CL1P78423 AL031119.1-201ENST00000404707 1879 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.07□□□□□ -1.76
CX3CL1P78423 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CL1P78423 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.07□□□□□ -1.76
CX3CL1P78423 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.07□□□□□ -1.76
CX3CL1P78423 AP005901.5-201ENST00000545779 1796 ntBASIC4.07□□□□□ -1.76
CX3CL1P78423 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CL1P78423 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CL1P78423 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CX3CL1P78423 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CL1P78423 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CL1P78423 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CL1P78423 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CL1P78423 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CL1P78423 AL451142.2-201ENST00000429076 2090 ntBASIC4.06□□□□□ -1.76
CX3CL1P78423 LINC01355-201ENST00000566551 5444 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms