Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AL591419.1-201ENST00000427423 339 ntBASIC5.59□□□□□ -1.51
CLTCL1P53675 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLTCL1P53675 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.59□□□□□ -1.51
CLTCL1P53675 RPL31P61-201ENST00000496160 376 ntBASIC5.59□□□□□ -1.51
CLTCL1P53675 CDH12P2-201ENST00000504393 298 ntBASIC5.59□□□□□ -1.51
CLTCL1P53675 AC068020.1-201ENST00000594215 661 ntBASIC5.59□□□□□ -1.51
CLTCL1P53675 AC012468.1-201ENST00000604888 430 ntBASIC5.59□□□□□ -1.51
CLTCL1P53675 AL773545.4-201ENST00000637262 310 ntBASIC5.59□□□□□ -1.51
CLTCL1P53675 AL513478.4-201ENST00000641636 310 ntBASIC5.59□□□□□ -1.51
CLTCL1P53675 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
CLTCL1P53675 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLTCL1P53675 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.59□□□□□ -1.51
CLTCL1P53675 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CLTCL1P53675 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.59□□□□□ -1.51
CLTCL1P53675 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLTCL1P53675 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CLTCL1P53675 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CLTCL1P53675 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CLTCL1P53675 RNU6-525P-201ENST00000363685 104 ntBASIC5.59□□□□□ -1.52
CLTCL1P53675 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CLTCL1P53675 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.59□□□□□ -1.52
CLTCL1P53675 MIR7-3-201ENST00000384898 110 ntBASIC5.59□□□□□ -1.52
CLTCL1P53675 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
CLTCL1P53675 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.59□□□□□ -1.52
CLTCL1P53675 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.59□□□□□ -1.52
CLTCL1P53675 MIR5187-201ENST00000583479 76 ntBASIC5.59□□□□□ -1.52
CLTCL1P53675 AL391497.1-201ENST00000608671 547 ntBASIC5.59□□□□□ -1.52
CLTCL1P53675 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLTCL1P53675 AL356274.2-201ENST00000624379 3752 ntBASIC5.58□□□□□ -1.52
CLTCL1P53675 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLTCL1P53675 AP001284.1-201ENST00000528393 2118 ntBASIC5.58□□□□□ -1.52
CLTCL1P53675 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLTCL1P53675 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.58□□□□□ -1.52
CLTCL1P53675 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLTCL1P53675 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CLTCL1P53675 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLTCL1P53675 AC092647.1-201ENST00000420654 287 ntBASIC5.58□□□□□ -1.52
CLTCL1P53675 PDSS1P1-201ENST00000422953 1114 ntBASIC5.58□□□□□ -1.52
CLTCL1P53675 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.58□□□□□ -1.52
CLTCL1P53675 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.58□□□□□ -1.52
CLTCL1P53675 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.58□□□□□ -1.52
CLTCL1P53675 HMGN1P15-201ENST00000513870 295 ntBASIC5.58□□□□□ -1.52
CLTCL1P53675 SNORA74D-201ENST00000516404 141 ntBASIC5.58□□□□□ -1.52
CLTCL1P53675 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.58□□□□□ -1.52
CLTCL1P53675 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.58□□□□□ -1.52
CLTCL1P53675 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.58□□□□□ -1.52
CLTCL1P53675 AL137849.1-201ENST00000604767 169 ntBASIC5.58□□□□□ -1.52
CLTCL1P53675 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.58□□□□□ -1.52
CLTCL1P53675 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.58□□□□□ -1.52
CLTCL1P53675 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLTCL1P53675 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLTCL1P53675 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CLTCL1P53675 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLTCL1P53675 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
CLTCL1P53675 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLTCL1P53675 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLTCL1P53675 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLTCL1P53675 UBDP1-202ENST00000457888 382 ntBASIC5.57□□□□□ -1.52
CLTCL1P53675 RNA5SP208-201ENST00000516156 78 ntBASIC5.57□□□□□ -1.52
CLTCL1P53675 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.57□□□□□ -1.52
CLTCL1P53675 OR4A2P-201ENST00000527276 913 ntBASIC5.57□□□□□ -1.52
CLTCL1P53675 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.57□□□□□ -1.52
CLTCL1P53675 AC096577.2-201ENST00000611455 153 ntBASIC5.57□□□□□ -1.52
CLTCL1P53675 AC091953.5-201ENST00000622919 233 ntBASIC5.57□□□□□ -1.52
CLTCL1P53675 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLTCL1P53675 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLTCL1P53675 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CLTCL1P53675 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CLTCL1P53675 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CLTCL1P53675 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.57□□□□□ -1.52
CLTCL1P53675 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.56□□□□□ -1.52
CLTCL1P53675 MIR200C-201ENST00000384980 68 ntBASIC5.56□□□□□ -1.52
CLTCL1P53675 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.56□□□□□ -1.52
CLTCL1P53675 EIF4EP1-201ENST00000422311 642 ntBASIC5.56□□□□□ -1.52
CLTCL1P53675 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.56□□□□□ -1.52
CLTCL1P53675 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.56□□□□□ -1.52
CLTCL1P53675 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.56□□□□□ -1.52
CLTCL1P53675 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.56□□□□□ -1.52
CLTCL1P53675 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.56□□□□□ -1.52
CLTCL1P53675 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.56□□□□□ -1.52
CLTCL1P53675 AC016839.1-201ENST00000578162 867 ntBASIC5.56□□□□□ -1.52
CLTCL1P53675 AP005262.1-201ENST00000582646 997 ntBASIC5.56□□□□□ -1.52
CLTCL1P53675 MIR3922-201ENST00000585192 84 ntBASIC5.56□□□□□ -1.52
CLTCL1P53675 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CLTCL1P53675 AC019176.2-201ENST00000611579 315 ntBASIC5.56□□□□□ -1.52
CLTCL1P53675 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.56□□□□□ -1.52
CLTCL1P53675 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLTCL1P53675 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLTCL1P53675 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CLTCL1P53675 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.56□□□□□ -1.52
CLTCL1P53675 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.56□□□□□ -1.52
CLTCL1P53675 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC5.56□□□□□ -1.52
CLTCL1P53675 HMGB1P37-201ENST00000439613 609 ntBASIC5.56□□□□□ -1.52
CLTCL1P53675 RAC1P2-201ENST00000511164 579 ntBASIC5.56□□□□□ -1.52
CLTCL1P53675 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.56□□□□□ -1.52
CLTCL1P53675 AL391261.4-201ENST00000616012 481 ntBASIC5.56□□□□□ -1.52
CLTCL1P53675 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC5.55□□□□□ -1.52
CLTCL1P53675 AL355596.1-201ENST00000565399 3996 ntBASIC5.55□□□□□ -1.52
CLTCL1P53675 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLTCL1P53675 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms