Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 CDH12P2-201ENST00000504393 298 ntBASIC5.25□□□□□ -1.57
COPB1P53618 AC010486.2-201ENST00000505572 483 ntBASIC5.25□□□□□ -1.57
COPB1P53618 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.25□□□□□ -1.57
COPB1P53618 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.25□□□□□ -1.57
COPB1P53618 AC118465.1-201ENST00000513820 1271 ntBASIC5.25□□□□□ -1.57
COPB1P53618 OR4A2P-201ENST00000527276 913 ntBASIC5.25□□□□□ -1.57
COPB1P53618 AC006518.2-201ENST00000542513 940 ntBASIC5.25□□□□□ -1.57
COPB1P53618 AC069366.1-201ENST00000583159 838 ntBASIC5.25□□□□□ -1.57
COPB1P53618 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.25□□□□□ -1.57
COPB1P53618 AC011453.2-201ENST00000603737 729 ntBASIC5.25□□□□□ -1.57
COPB1P53618 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.25□□□□□ -1.57
COPB1P53618 AC093799.2-201ENST00000610062 578 ntBASIC5.25□□□□□ -1.57
COPB1P53618 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
COPB1P53618 AP004607.9-201ENST00000618202 316 ntBASIC5.25□□□□□ -1.57
COPB1P53618 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.25□□□□□ -1.57
COPB1P53618 AC004943.3-201ENST00000624116 600 ntBASIC5.25□□□□□ -1.57
COPB1P53618 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.25□□□□□ -1.57
COPB1P53618 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.25□□□□□ -1.57
COPB1P53618 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.25□□□□□ -1.57
COPB1P53618 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.25□□□□□ -1.57
COPB1P53618 AL121594.5-201ENST00000631724 573 ntBASIC5.25□□□□□ -1.57
COPB1P53618 AL121950.1-201ENST00000624993 2077 ntBASIC5.25□□□□□ -1.57
COPB1P53618 TLK1P1-201ENST00000456760 2440 ntBASIC5.25□□□□□ -1.57
COPB1P53618 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.25□□□□□ -1.57
COPB1P53618 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.25□□□□□ -1.57
COPB1P53618 CDC27P2-201ENST00000425026 1922 ntBASIC5.25□□□□□ -1.57
COPB1P53618 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.24□□□□□ -1.57
COPB1P53618 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPB1P53618 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COPB1P53618 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COPB1P53618 OR5H2-201ENST00000355273 945 ntBASIC5.24□□□□□ -1.57
COPB1P53618 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COPB1P53618 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPB1P53618 AC005033.1-201ENST00000428904 813 ntBASIC5.24□□□□□ -1.57
COPB1P53618 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.24□□□□□ -1.57
COPB1P53618 AC093414.1-201ENST00000434712 514 ntBASIC5.24□□□□□ -1.57
COPB1P53618 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.24□□□□□ -1.57
COPB1P53618 RPL7P11-201ENST00000437586 658 ntBASIC5.24□□□□□ -1.57
COPB1P53618 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.24□□□□□ -1.57
COPB1P53618 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.24□□□□□ -1.57
COPB1P53618 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.24□□□□□ -1.57
COPB1P53618 RPL7AP6-201ENST00000477943 801 ntBASIC5.24□□□□□ -1.57
COPB1P53618 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.24□□□□□ -1.57
COPB1P53618 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.24□□□□□ -1.57
COPB1P53618 RN7SL346P-201ENST00000491561 294 ntBASIC5.24□□□□□ -1.57
COPB1P53618 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.24□□□□□ -1.57
COPB1P53618 AC010486.3-201ENST00000511602 785 ntBASIC5.24□□□□□ -1.57
COPB1P53618 MTCO3P28-201ENST00000513351 515 ntBASIC5.24□□□□□ -1.57
COPB1P53618 RN7SKP34-201ENST00000516142 244 ntBASIC5.24□□□□□ -1.57
COPB1P53618 CDH12P4-201ENST00000517835 295 ntBASIC5.24□□□□□ -1.57
COPB1P53618 CDH12P3-201ENST00000517935 295 ntBASIC5.24□□□□□ -1.57
COPB1P53618 CDH12P1-201ENST00000518435 295 ntBASIC5.24□□□□□ -1.57
COPB1P53618 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COPB1P53618 AC092490.3-201ENST00000545370 572 ntBASIC5.24□□□□□ -1.57
COPB1P53618 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.24□□□□□ -1.57
COPB1P53618 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.24□□□□□ -1.57
COPB1P53618 AC124856.1-201ENST00000600819 896 ntBASIC5.24□□□□□ -1.57
COPB1P53618 AC091057.2-201ENST00000602594 792 ntBASIC5.24□□□□□ -1.57
COPB1P53618 AL353778.1-201ENST00000603149 408 ntBASIC5.24□□□□□ -1.57
COPB1P53618 AL049844.2-201ENST00000604280 628 ntBASIC5.24□□□□□ -1.57
COPB1P53618 COX6CP4-201ENST00000605798 228 ntBASIC5.24□□□□□ -1.57
COPB1P53618 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.24□□□□□ -1.57
COPB1P53618 FRG1HP-204ENST00000617940 757 ntBASIC5.24□□□□□ -1.57
COPB1P53618 AC005086.4-201ENST00000623065 213 ntBASIC5.24□□□□□ -1.57
COPB1P53618 AC010435.1-201ENST00000623353 1177 ntBASIC5.24□□□□□ -1.57
COPB1P53618 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.24□□□□□ -1.57
COPB1P53618 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.24□□□□□ -1.57
COPB1P53618 LINC01739-205ENST00000641890 573 ntBASIC5.24□□□□□ -1.57
COPB1P53618 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
COPB1P53618 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPB1P53618 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
COPB1P53618 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
COPB1P53618 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.23□□□□□ -1.57
COPB1P53618 AC108751.5-201ENST00000492880 1336 ntBASIC5.23□□□□□ -1.57
COPB1P53618 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COPB1P53618 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COPB1P53618 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.23□□□□□ -1.57
COPB1P53618 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COPB1P53618 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.23□□□□□ -1.57
COPB1P53618 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.23□□□□□ -1.57
COPB1P53618 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
COPB1P53618 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COPB1P53618 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COPB1P53618 RPL23P2-201ENST00000320371 421 ntBASIC5.23□□□□□ -1.57
COPB1P53618 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COPB1P53618 RNU6-1214P-201ENST00000363650 109 ntBASIC5.23□□□□□ -1.57
COPB1P53618 RNU6-224P-201ENST00000384055 107 ntBASIC5.23□□□□□ -1.57
COPB1P53618 MIR585-201ENST00000384887 94 ntBASIC5.23□□□□□ -1.57
COPB1P53618 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.23□□□□□ -1.57
COPB1P53618 AL139128.1-201ENST00000413921 941 ntBASIC5.23□□□□□ -1.57
COPB1P53618 AC009518.2-201ENST00000418056 731 ntBASIC5.23□□□□□ -1.57
COPB1P53618 LINC00993-201ENST00000420453 540 ntBASIC5.23□□□□□ -1.57
COPB1P53618 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.23□□□□□ -1.57
COPB1P53618 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.23□□□□□ -1.57
COPB1P53618 EEF1A1P39-201ENST00000440791 250 ntBASIC5.23□□□□□ -1.57
COPB1P53618 AC104651.2-201ENST00000447549 528 ntBASIC5.23□□□□□ -1.57
COPB1P53618 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.23□□□□□ -1.57
COPB1P53618 AC005410.1-202ENST00000460347 485 ntBASIC5.23□□□□□ -1.57
COPB1P53618 AC010468.1-201ENST00000461022 817 ntBASIC5.23□□□□□ -1.57
COPB1P53618 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms