Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.61□□□□□ -1.67
SOX2P48431 ACTG1P13-201ENST00000486987 1043 ntBASIC4.61□□□□□ -1.67
SOX2P48431 RPS27P23-201ENST00000487608 251 ntBASIC4.61□□□□□ -1.67
SOX2P48431 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.61□□□□□ -1.67
SOX2P48431 AC092045.1-201ENST00000495716 1231 ntBASIC4.61□□□□□ -1.67
SOX2P48431 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SOX2P48431 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.61□□□□□ -1.67
SOX2P48431 AC109471.1-201ENST00000511631 612 ntBASIC4.61□□□□□ -1.67
SOX2P48431 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.61□□□□□ -1.67
SOX2P48431 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.61□□□□□ -1.67
SOX2P48431 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.61□□□□□ -1.67
SOX2P48431 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.61□□□□□ -1.67
SOX2P48431 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.61□□□□□ -1.67
SOX2P48431 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
SOX2P48431 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.61□□□□□ -1.67
SOX2P48431 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SOX2P48431 LSM3P2-201ENST00000551246 273 ntBASIC4.61□□□□□ -1.67
SOX2P48431 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.61□□□□□ -1.67
SOX2P48431 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.61□□□□□ -1.67
SOX2P48431 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.61□□□□□ -1.67
SOX2P48431 AC005341.1-201ENST00000571086 708 ntBASIC4.61□□□□□ -1.67
SOX2P48431 MIR3915-201ENST00000578518 97 ntBASIC4.61□□□□□ -1.67
SOX2P48431 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.61□□□□□ -1.67
SOX2P48431 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.61□□□□□ -1.67
SOX2P48431 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.61□□□□□ -1.67
SOX2P48431 AL031985.2-201ENST00000600955 480 ntBASIC4.61□□□□□ -1.67
SOX2P48431 AL137072.1-201ENST00000603444 466 ntBASIC4.61□□□□□ -1.67
SOX2P48431 AC103881.1-201ENST00000603476 538 ntBASIC4.61□□□□□ -1.67
SOX2P48431 AC009163.6-201ENST00000612367 342 ntBASIC4.61□□□□□ -1.67
SOX2P48431 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SOX2P48431 AC008115.3-201ENST00000614874 549 ntBASIC4.61□□□□□ -1.67
SOX2P48431 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.61□□□□□ -1.67
SOX2P48431 MIR193BHG-214ENST00000641765 509 ntBASIC4.61□□□□□ -1.67
SOX2P48431 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.61□□□□□ -1.67
SOX2P48431 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SOX2P48431 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.61□□□□□ -1.67
SOX2P48431 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SOX2P48431 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
SOX2P48431 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SOX2P48431 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SOX2P48431 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.6□□□□□ -1.67
SOX2P48431 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SOX2P48431 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SOX2P48431 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SOX2P48431 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SOX2P48431 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.6□□□□□ -1.67
SOX2P48431 RNU6-1066P-201ENST00000363573 105 ntBASIC4.6□□□□□ -1.67
SOX2P48431 RNU6-621P-201ENST00000364752 109 ntBASIC4.6□□□□□ -1.67
SOX2P48431 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.6□□□□□ -1.67
SOX2P48431 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SOX2P48431 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SOX2P48431 Y_RNA.560-201ENST00000384689 102 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.6□□□□□ -1.67
SOX2P48431 RN7SKP16-201ENST00000410180 299 ntBASIC4.6□□□□□ -1.67
SOX2P48431 RNU2-42P-201ENST00000410697 113 ntBASIC4.6□□□□□ -1.67
SOX2P48431 RNU2-6P-201ENST00000411404 190 ntBASIC4.6□□□□□ -1.67
SOX2P48431 CTSL3P-202ENST00000412179 788 ntBASIC4.6□□□□□ -1.67
SOX2P48431 OR6C64P-201ENST00000419708 825 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AC104333.2-201ENST00000422630 192 ntBASIC4.6□□□□□ -1.67
SOX2P48431 DYNLL1P7-201ENST00000429273 258 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.6□□□□□ -1.67
SOX2P48431 FMO7P-201ENST00000436045 768 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AC129850.1-201ENST00000436203 508 ntBASIC4.6□□□□□ -1.67
SOX2P48431 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.6□□□□□ -1.67
SOX2P48431 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.6□□□□□ -1.67
SOX2P48431 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.6□□□□□ -1.67
SOX2P48431 AC012512.1-201ENST00000446594 718 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.6□□□□□ -1.67
SOX2P48431 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.6□□□□□ -1.67
SOX2P48431 AC084754.1-201ENST00000463466 464 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AC011476.1-201ENST00000466725 307 ntBASIC4.6□□□□□ -1.67
SOX2P48431 RN7SL189P-201ENST00000468631 289 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AC023424.1-201ENST00000496058 459 ntBASIC4.6□□□□□ -1.67
SOX2P48431 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.6□□□□□ -1.67
SOX2P48431 AC147055.4-201ENST00000504399 745 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.6□□□□□ -1.67
SOX2P48431 HMGB1P44-201ENST00000508597 572 ntBASIC4.6□□□□□ -1.67
SOX2P48431 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.6□□□□□ -1.67
SOX2P48431 RNA5SP271-201ENST00000516700 88 ntBASIC4.6□□□□□ -1.67
SOX2P48431 RNU6-678P-201ENST00000516832 109 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.6□□□□□ -1.67
SOX2P48431 TRIM77BP-201ENST00000524985 1119 ntBASIC4.6□□□□□ -1.67
SOX2P48431 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.6□□□□□ -1.67
SOX2P48431 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.6□□□□□ -1.67
SOX2P48431 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SOX2P48431 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.6□□□□□ -1.67
SOX2P48431 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
SOX2P48431 AL049872.1-201ENST00000556323 322 ntBASIC4.6□□□□□ -1.67
SOX2P48431 ACTR3BP3-201ENST00000565577 979 ntBASIC4.6□□□□□ -1.67
SOX2P48431 RN7SL708P-201ENST00000580952 299 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.6□□□□□ -1.67
SOX2P48431 AC133552.5-201ENST00000604266 540 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AC090425.2-201ENST00000608818 501 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AC004948.1-201ENST00000609858 672 ntBASIC4.6□□□□□ -1.67
SOX2P48431 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AC090116.1-201ENST00000615679 446 ntBASIC4.6□□□□□ -1.67
SOX2P48431 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AC244100.4-201ENST00000617747 388 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms