Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.06□□□□□ -1.76
NKX2-1P43699 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-1P43699 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-1P43699 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-1P43699 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 XPOTP1-201ENST00000443317 2398 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NKX2-1P43699 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NKX2-1P43699 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NKX2-1P43699 LINC01109-201ENST00000603837 3081 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
NKX2-1P43699 AC011155.1-201ENST00000316512 456 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.05□□□□□ -1.76
NKX2-1P43699 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NKX2-1P43699 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NKX2-1P43699 RNA5SP335-201ENST00000363817 110 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
NKX2-1P43699 RNU6-906P-201ENST00000384700 70 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 RNU1-149P-201ENST00000390870 161 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 MCTS2P-201ENST00000394552 546 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.05□□□□□ -1.76
NKX2-1P43699 RN7SKP293-201ENST00000411389 296 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.05□□□□□ -1.76
NKX2-1P43699 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.05□□□□□ -1.76
NKX2-1P43699 VPS26BP1-201ENST00000417155 755 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.05□□□□□ -1.76
NKX2-1P43699 RGS17P1-201ENST00000423358 553 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.05□□□□□ -1.76
NKX2-1P43699 AC002069.1-201ENST00000429649 1159 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 RPS27P18-201ENST00000431701 247 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.05□□□□□ -1.76
NKX2-1P43699 CR769776.1-201ENST00000441254 787 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 ARL4AP3-201ENST00000441452 574 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 AL161636.2-201ENST00000445179 927 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 HMGB1P48-201ENST00000446155 598 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 AC004022.1-201ENST00000447766 1066 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.05□□□□□ -1.76
NKX2-1P43699 YWHAEP1-201ENST00000453697 763 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 RPS6P2-201ENST00000454208 705 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.05□□□□□ -1.76
NKX2-1P43699 AL139824.2-201ENST00000458731 1095 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 RN7SL517P-201ENST00000462240 305 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 RPL21P71-201ENST00000465598 459 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.05□□□□□ -1.76
NKX2-1P43699 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
NKX2-1P43699 NIP7P2-201ENST00000485801 544 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 PPIAP19-201ENST00000486414 492 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.05□□□□□ -1.76
NKX2-1P43699 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 GTF2F2P1-201ENST00000511083 675 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.05□□□□□ -1.76
NKX2-1P43699 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.05□□□□□ -1.76
NKX2-1P43699 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.05□□□□□ -1.76
NKX2-1P43699 HMGB1P19-201ENST00000517578 577 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.05□□□□□ -1.76
NKX2-1P43699 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.05□□□□□ -1.76
NKX2-1P43699 HIGD1AP6-201ENST00000521833 279 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
NKX2-1P43699 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.05□□□□□ -1.76
NKX2-1P43699 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.05□□□□□ -1.76
NKX2-1P43699 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.05□□□□□ -1.76
NKX2-1P43699 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.05□□□□□ -1.76
NKX2-1P43699 SERPINE4P-201ENST00000554978 281 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.05□□□□□ -1.76
NKX2-1P43699 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.05□□□□□ -1.76
NKX2-1P43699 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.05□□□□□ -1.76
NKX2-1P43699 MIR1273E-201ENST00000581165 102 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.05□□□□□ -1.76
NKX2-1P43699 RN7SL52P-201ENST00000584271 284 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.05□□□□□ -1.76
NKX2-1P43699 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.05□□□□□ -1.76
NKX2-1P43699 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.05□□□□□ -1.76
NKX2-1P43699 AC091488.1-201ENST00000604239 660 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.05□□□□□ -1.76
NKX2-1P43699 RN7SL787P-201ENST00000613000 284 ntBASIC4.05□□□□□ -1.76
NKX2-1P43699 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.05□□□□□ -1.76
NKX2-1P43699 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NKX2-1P43699 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.05□□□□□ -1.76
NKX2-1P43699 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.05□□□□□ -1.76
NKX2-1P43699 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.05□□□□□ -1.76
NKX2-1P43699 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NKX2-1P43699 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NKX2-1P43699 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
NKX2-1P43699 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NKX2-1P43699 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
NKX2-1P43699 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-1P43699 AC099786.3-201ENST00000565735 1410 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 AC009643.2-201ENST00000603543 1448 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX2-1P43699 MFSD8-220ENST00000641243 1422 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-1P43699 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-1P43699 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-1P43699 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.04□□□□□ -1.76
NKX2-1P43699 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NKX2-1P43699 TMSB4XP4-201ENST00000323496 618 ntBASIC4.04□□□□□ -1.76
NKX2-1P43699 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
NKX2-1P43699 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms