Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 DNAJC19P7-201ENST00000428811 344 ntBASIC7.39□□□□□ -1.23
COL9A1P20849 MTCO3P29-201ENST00000432119 779 ntBASIC7.39□□□□□ -1.23
COL9A1P20849 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC7.39□□□□□ -1.23
COL9A1P20849 RN7SL515P-201ENST00000463999 297 ntBASIC7.39□□□□□ -1.23
COL9A1P20849 RPS26P24-201ENST00000497656 331 ntBASIC7.39□□□□□ -1.23
COL9A1P20849 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC7.39□□□□□ -1.23
COL9A1P20849 HMGN1P16-201ENST00000508308 283 ntBASIC7.39□□□□□ -1.23
COL9A1P20849 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC7.39□□□□□ -1.23
COL9A1P20849 RNU7-51P-201ENST00000516560 62 ntBASIC7.39□□□□□ -1.23
COL9A1P20849 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC7.39□□□□□ -1.23
COL9A1P20849 EEF1B2P2-201ENST00000519625 676 ntBASIC7.39□□□□□ -1.23
COL9A1P20849 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.39□□□□□ -1.23
COL9A1P20849 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC7.39□□□□□ -1.23
COL9A1P20849 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.39□□□□□ -1.23
COL9A1P20849 RNF138P2-201ENST00000603490 592 ntBASIC7.39□□□□□ -1.23
COL9A1P20849 AL031666.3-201ENST00000609320 1006 ntBASIC7.39□□□□□ -1.23
COL9A1P20849 AC103710.2-201ENST00000609912 942 ntBASIC7.39□□□□□ -1.23
COL9A1P20849 MRPL57P3-201ENST00000619218 176 ntBASIC7.39□□□□□ -1.23
COL9A1P20849 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.39□□□□□ -1.23
COL9A1P20849 AL357559.1-201ENST00000622228 274 ntBASIC7.39□□□□□ -1.23
COL9A1P20849 AL159972.1-201ENST00000625150 448 ntBASIC7.39□□□□□ -1.23
COL9A1P20849 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC7.39□□□□□ -1.23
COL9A1P20849 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL9A1P20849 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
COL9A1P20849 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.39□□□□□ -1.23
COL9A1P20849 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC7.39□□□□□ -1.23
COL9A1P20849 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
COL9A1P20849 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL9A1P20849 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.39□□□□□ -1.23
COL9A1P20849 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
COL9A1P20849 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL9A1P20849 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 AC007406.5-201ENST00000570140 3170 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 AC016251.1-201ENST00000624299 4198 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
COL9A1P20849 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
COL9A1P20849 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC7.38□□□□□ -1.23
COL9A1P20849 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC7.38□□□□□ -1.23
COL9A1P20849 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.38□□□□□ -1.23
COL9A1P20849 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.38□□□□□ -1.23
COL9A1P20849 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
COL9A1P20849 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
COL9A1P20849 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC7.38□□□□□ -1.23
COL9A1P20849 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 RNU6-179P-201ENST00000363350 107 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.38□□□□□ -1.23
COL9A1P20849 RNU6-128P-201ENST00000383976 107 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 RNU6-317P-201ENST00000384031 107 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 RNU6-378P-201ENST00000384324 107 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 AC004386.1-201ENST00000393214 761 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 MIR548H3-201ENST00000408771 118 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 AL929472.1-201ENST00000417484 429 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 AC000089.1-201ENST00000424559 801 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC7.38□□□□□ -1.23
COL9A1P20849 AC108734.1-201ENST00000439549 399 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC7.38□□□□□ -1.23
COL9A1P20849 AC011225.1-201ENST00000457751 369 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 RPS26P39-201ENST00000469206 341 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 AP000893.1-201ENST00000474462 794 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 RN7SL775P-201ENST00000498361 336 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.38□□□□□ -1.23
COL9A1P20849 AC021146.3-201ENST00000511911 260 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 AC093878.1-201ENST00000515630 432 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 RNU6-1212P-201ENST00000517023 104 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 IGKV2-19-201ENST00000518132 283 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC7.38□□□□□ -1.23
COL9A1P20849 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC7.38□□□□□ -1.23
COL9A1P20849 NPIPB1P-202ENST00000588786 828 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
COL9A1P20849 MRPS5P4-201ENST00000592830 325 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 SNX29P2-204ENST00000603801 875 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
COL9A1P20849 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC7.38□□□□□ -1.23
COL9A1P20849 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC7.38□□□□□ -1.23
COL9A1P20849 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
COL9A1P20849 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
COL9A1P20849 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
COL9A1P20849 AC131392.2-201ENST00000505635 4332 ntBASIC7.38□□□□□ -1.23
COL9A1P20849 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms