Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC044797.1-201ENST00000445744 679 ntBASIC4.39□□□□□ -1.71
SNX3O60493 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX3O60493 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX3O60493 GXYLT1P1-201ENST00000446657 490 ntBASIC4.39□□□□□ -1.71
SNX3O60493 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX3O60493 RPL23AP71-201ENST00000470966 469 ntBASIC4.39□□□□□ -1.71
SNX3O60493 RPS4XP1-201ENST00000482189 787 ntBASIC4.39□□□□□ -1.71
SNX3O60493 TPT1P3-201ENST00000492841 512 ntBASIC4.39□□□□□ -1.71
SNX3O60493 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX3O60493 MORF4L1P3-201ENST00000525966 950 ntBASIC4.39□□□□□ -1.71
SNX3O60493 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SNX3O60493 AC126365.2-201ENST00000580630 379 ntBASIC4.39□□□□□ -1.71
SNX3O60493 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX3O60493 PSMA6P4-201ENST00000603247 718 ntBASIC4.39□□□□□ -1.71
SNX3O60493 HMGB1P50-201ENST00000605814 607 ntBASIC4.39□□□□□ -1.71
SNX3O60493 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.39□□□□□ -1.71
SNX3O60493 AP002967.1-201ENST00000624203 539 ntBASIC4.39□□□□□ -1.71
SNX3O60493 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX3O60493 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX3O60493 AC027290.2-201ENST00000623210 18662 ntBASIC4.39□□□□□ -1.71
SNX3O60493 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.39□□□□□ -1.71
SNX3O60493 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX3O60493 MTND4P9-201ENST00000507819 1346 ntBASIC4.39□□□□□ -1.71
SNX3O60493 LINC00622-201ENST00000562811 1570 ntBASIC4.39□□□□□ -1.71
SNX3O60493 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX3O60493 AL137100.1-201ENST00000556703 1620 ntBASIC4.39□□□□□ -1.71
SNX3O60493 AC096656.1-201ENST00000623826 1364 ntBASIC4.39□□□□□ -1.71
SNX3O60493 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNX3O60493 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX3O60493 AC006042.3-201ENST00000454684 1469 ntBASIC4.38□□□□□ -1.71
SNX3O60493 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SNX3O60493 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX3O60493 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNX3O60493 MIR620-201ENST00000385232 95 ntBASIC4.38□□□□□ -1.71
SNX3O60493 RNU2-50P-201ENST00000410494 143 ntBASIC4.38□□□□□ -1.71
SNX3O60493 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNX3O60493 AL354692.1-201ENST00000423044 315 ntBASIC4.38□□□□□ -1.71
SNX3O60493 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX3O60493 AL031663.1-201ENST00000437445 219 ntBASIC4.38□□□□□ -1.71
SNX3O60493 AC245047.2-201ENST00000441060 530 ntBASIC4.38□□□□□ -1.71
SNX3O60493 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX3O60493 AC073109.1-201ENST00000445066 978 ntBASIC4.38□□□□□ -1.71
SNX3O60493 AC010733.1-201ENST00000451515 401 ntBASIC4.38□□□□□ -1.71
SNX3O60493 AL035407.2-201ENST00000454090 378 ntBASIC4.38□□□□□ -1.71
SNX3O60493 AURKAPS2-201ENST00000454983 333 ntBASIC4.38□□□□□ -1.71
SNX3O60493 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX3O60493 RPS17P11-201ENST00000474297 293 ntBASIC4.38□□□□□ -1.71
SNX3O60493 AC010374.2-201ENST00000512933 535 ntBASIC4.38□□□□□ -1.71
SNX3O60493 AC006518.1-201ENST00000541449 943 ntBASIC4.38□□□□□ -1.71
SNX3O60493 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX3O60493 AC027104.1-201ENST00000563702 681 ntBASIC4.38□□□□□ -1.71
SNX3O60493 NDUFA5P11-201ENST00000567995 343 ntBASIC4.38□□□□□ -1.71
SNX3O60493 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.38□□□□□ -1.71
SNX3O60493 AC123786.2-201ENST00000603459 275 ntBASIC4.38□□□□□ -1.71
SNX3O60493 AC096586.1-201ENST00000610267 561 ntBASIC4.38□□□□□ -1.71
SNX3O60493 AC126915.2-201ENST00000610957 190 ntBASIC4.38□□□□□ -1.71
SNX3O60493 U6.48-201ENST00000618523 106 ntBASIC4.38□□□□□ -1.71
SNX3O60493 AC022306.3-201ENST00000619930 550 ntBASIC4.38□□□□□ -1.71
SNX3O60493 AP001005.3-201ENST00000622049 129 ntBASIC4.38□□□□□ -1.71
SNX3O60493 AC138907.10-201ENST00000623708 983 ntBASIC4.38□□□□□ -1.71
SNX3O60493 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.38□□□□□ -1.71
SNX3O60493 CASC19-264ENST00000641912 1184 ntBASIC4.38□□□□□ -1.71
SNX3O60493 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX3O60493 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX3O60493 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX3O60493 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.38□□□□□ -1.71
SNX3O60493 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SNX3O60493 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SNX3O60493 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SNX3O60493 CPHL1P-201ENST00000461341 3407 ntBASIC4.37□□□□□ -1.71
SNX3O60493 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX3O60493 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX3O60493 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX3O60493 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
SNX3O60493 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SNX3O60493 AC093719.1-202ENST00000392735 373 ntBASIC4.37□□□□□ -1.71
SNX3O60493 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX3O60493 MIR1303-201ENST00000408625 86 ntBASIC4.37□□□□□ -1.71
SNX3O60493 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.37□□□□□ -1.71
SNX3O60493 RN7SKP293-201ENST00000411389 296 ntBASIC4.37□□□□□ -1.71
SNX3O60493 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX3O60493 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX3O60493 AC009302.1-201ENST00000417147 390 ntBASIC4.37□□□□□ -1.71
SNX3O60493 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX3O60493 AC092647.1-201ENST00000420654 287 ntBASIC4.37□□□□□ -1.71
SNX3O60493 AL391219.1-201ENST00000422570 483 ntBASIC4.37□□□□□ -1.71
SNX3O60493 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNX3O60493 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX3O60493 RPL23AP89-201ENST00000439324 255 ntBASIC4.37□□□□□ -1.71
SNX3O60493 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.37□□□□□ -1.71
SNX3O60493 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX3O60493 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX3O60493 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SNX3O60493 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.37□□□□□ -1.71
SNX3O60493 RN7SL809P-201ENST00000482040 297 ntBASIC4.37□□□□□ -1.71
SNX3O60493 AC093801.2-201ENST00000503966 1050 ntBASIC4.37□□□□□ -1.71
SNX3O60493 SCARNA22-201ENST00000503991 125 ntBASIC4.37□□□□□ -1.71
SNX3O60493 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.37□□□□□ -1.71
SNX3O60493 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.37□□□□□ -1.71
SNX3O60493 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms