Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TRIM38O00635 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.23□□□□□ -1.57
TRIM38O00635 AC118282.2-201ENST00000508739 374 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM38O00635 RNU6-311P-201ENST00000516224 102 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 RNU6-416P-201ENST00000516265 103 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 RN7SKP147-201ENST00000517154 244 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM38O00635 OR7E128P-201ENST00000532736 1024 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
TRIM38O00635 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM38O00635 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM38O00635 AC006349.1-201ENST00000555526 235 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.23□□□□□ -1.57
TRIM38O00635 MIR4472-2-201ENST00000582069 67 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 MIR4480-201ENST00000582492 71 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM38O00635 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM38O00635 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM38O00635 GAS5-AS1-201ENST00000602767 694 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 AL035411.2-201ENST00000604022 421 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.23□□□□□ -1.57
TRIM38O00635 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM38O00635 MIR6820-201ENST00000611508 62 ntBASIC5.23□□□□□ -1.57
TRIM38O00635 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.23□□□□□ -1.57
TRIM38O00635 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM38O00635 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM38O00635 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM38O00635 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM38O00635 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM38O00635 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM38O00635 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TRIM38O00635 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TRIM38O00635 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM38O00635 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM38O00635 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM38O00635 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM38O00635 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM38O00635 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM38O00635 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.23□□□□□ -1.57
TRIM38O00635 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TRIM38O00635 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.23□□□□□ -1.57
TRIM38O00635 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM38O00635 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRIM38O00635 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM38O00635 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM38O00635 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM38O00635 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM38O00635 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRIM38O00635 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
TRIM38O00635 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM38O00635 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM38O00635 AC025263.3-201ENST00000622965 1396 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
TRIM38O00635 AL512646.1-201ENST00000269395 1077 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRIM38O00635 RNU6-603P-201ENST00000411403 107 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 OR51B3P-201ENST00000412287 913 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM38O00635 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM38O00635 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM38O00635 RPF2P1-201ENST00000424137 906 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 C1DP1-201ENST00000426049 402 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM38O00635 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM38O00635 AC006466.1-201ENST00000438721 289 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM38O00635 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM38O00635 MRPL35P4-201ENST00000453682 566 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM38O00635 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM38O00635 Z92846.1-201ENST00000456203 268 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM38O00635 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM38O00635 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM38O00635 RNA5SP228-201ENST00000516232 133 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM38O00635 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
TRIM38O00635 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM38O00635 HIGD1AP5-201ENST00000529959 259 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM38O00635 AL356057.1-201ENST00000533798 831 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM38O00635 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM38O00635 AC024940.3-201ENST00000538551 316 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM38O00635 AC068993.1-201ENST00000546724 589 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM38O00635 AC027807.1-201ENST00000559921 996 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 NIFKP8-201ENST00000560500 874 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM38O00635 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM38O00635 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.22□□□□□ -1.57
TRIM38O00635 AP000769.2-201ENST00000602344 396 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 AC104785.1-201ENST00000603220 588 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 AL137072.1-201ENST00000603444 466 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 FAM25E-202ENST00000608562 189 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 AC123768.4-201ENST00000616244 701 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 AC231759.1-201ENST00000616455 597 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms