Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 RNU1-132P-201ENST00000364300 164 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 Y_RNA.333-201ENST00000365274 102 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 MT-TP-201ENST00000387461 68 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 RNA5SP372-201ENST00000390836 115 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 SDHCP2-201ENST00000398565 501 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 AC093084.1-201ENST00000424233 687 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 MTND4LP14-201ENST00000429447 288 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 AC090543.1-201ENST00000492168 485 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 COL6A4P2-205ENST00000509855 506 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 AC021146.3-201ENST00000511911 260 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 AC034244.2-201ENST00000514668 858 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 AC109635.6-201ENST00000525487 1113 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 SNX6P1-201ENST00000601728 1224 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 AC004241.3-201ENST00000611728 517 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 AL356490.1-201ENST00000623079 479 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 CFTRP2-201ENST00000634304 199 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 AC092435.4-201ENST00000623012 4159 ntBASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TRABD2BA6NFA1 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TRABD2BA6NFA1 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
TRABD2BA6NFA1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 AC008549.2-201ENST00000333482 706 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 RNU6-1320P-201ENST00000390838 107 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 RNU6-1269P-201ENST00000391139 107 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 AL034403.1-201ENST00000399414 885 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 UBE2V1P15-201ENST00000407776 448 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 OR2X1P-201ENST00000421144 687 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 RPL7P2-201ENST00000427639 268 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 AL606490.7-201ENST00000433136 191 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 AL590762.3-201ENST00000436372 640 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 RNU6-599P-201ENST00000459383 107 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 RNU6-1193P-201ENST00000459461 107 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 AC104629.2-201ENST00000468627 598 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 RPL7L1P8-201ENST00000469911 741 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 AC108475.1-201ENST00000507880 950 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 AC016550.3-201ENST00000515706 767 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 AP001160.4-201ENST00000596971 382 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 RNU6-368P-201ENST00000620928 107 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 RNU6-538P-201ENST00000622329 107 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 AL356094.1-201ENST00000624663 1212 ntBASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.33□□□□□ -1.72
TRABD2BA6NFA1 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms