Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC006349.1-201ENST00000555526 235 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC106785.3-201ENST00000564064 847 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 KPNA2P3-201ENST00000584190 848 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC008782.1-201ENST00000603386 430 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC005972.3-201ENST00000606304 481 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC010857.1-201ENST00000606398 594 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AL512506.1-201ENST00000613918 449 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AP001642.1-201ENST00000624727 2117 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AL031119.1-201ENST00000404707 1879 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 AL353743.4-201ENST00000422653 1547 ntBASIC4.62□□□□□ -1.67
PCDHGA1Q9Y5H4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 SNORA40.4-201ENST00000390971 128 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 LINC01347-201ENST00000417964 355 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 RPL34P6-201ENST00000432390 345 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 PRPF38AP1-201ENST00000451976 933 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AL691482.1-201ENST00000453255 87 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 CYCSP53-201ENST00000455540 265 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AC011276.1-201ENST00000469688 323 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 RNA5SP360-201ENST00000516555 118 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AC022882.1-201ENST00000532142 501 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 DYNLL1P4-201ENST00000549314 266 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AL136520.1-202ENST00000555494 763 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AC040958.1-201ENST00000561102 201 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AC007224.1-201ENST00000564410 144 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 PRPF19P1-201ENST00000584766 898 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AC011477.5-201ENST00000586571 259 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 ADAD1P2-201ENST00000588476 646 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AC011374.2-201ENST00000607135 526 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AC006946.3-201ENST00000609791 756 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AL121890.3-201ENST00000618494 516 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AC106730.3-201ENST00000624568 641 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AL049536.1-201ENST00000625043 744 ntBASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.61□□□□□ -1.67
PCDHGA1Q9Y5H4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AC000374.1-201ENST00000434698 1745 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 OR4K17-201ENST00000315543 1032 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 OR52E6-202ENST00000379946 954 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 KCTD10P1-201ENST00000434203 625 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 RPL7P29-201ENST00000437151 728 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 ACTR3P2-201ENST00000439585 1257 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AC245028.2-201ENST00000458673 253 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 RPL7AP28-201ENST00000464513 571 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 AC021660.1-201ENST00000465006 554 ntBASIC4.6□□□□□ -1.67
PCDHGA1Q9Y5H4 RPL23AP73-201ENST00000492507 471 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms