Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC097063.1-201ENST00000426714 1797 ntBASIC5.97□□□□□ -1.45
TRIM55Q9BYV6 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM55Q9BYV6 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM55Q9BYV6 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM55Q9BYV6 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM55Q9BYV6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM55Q9BYV6 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM55Q9BYV6 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM55Q9BYV6 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM55Q9BYV6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM55Q9BYV6 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.96□□□□□ -1.45
TRIM55Q9BYV6 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.96□□□□□ -1.45
TRIM55Q9BYV6 ADAM24P-201ENST00000398655 2101 ntBASIC5.96□□□□□ -1.45
TRIM55Q9BYV6 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM55Q9BYV6 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM55Q9BYV6 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.96□□□□□ -1.45
TRIM55Q9BYV6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
TRIM55Q9BYV6 MTND4P26-201ENST00000415971 1359 ntBASIC5.96□□□□□ -1.45
TRIM55Q9BYV6 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 FGF7P2-201ENST00000332473 296 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 RNU5F-7P-201ENST00000363696 115 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 RPL31P52-201ENST00000407532 367 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 HMGN1P20-201ENST00000411849 300 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 UBTFL3-201ENST00000418934 1024 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 RPS3P2-201ENST00000421346 701 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 OR5BE1P-201ENST00000425977 939 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC138761.5-201ENST00000433967 325 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC023347.2-201ENST00000433994 462 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC092641.1-201ENST00000440229 772 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 RPS26P56-201ENST00000444468 240 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC097463.1-201ENST00000447288 481 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 ACA64.4-201ENST00000459070 127 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 RN7SL369P-201ENST00000477138 299 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 UBTFL6-201ENST00000477929 1024 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 RN7SL809P-201ENST00000482040 297 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 GLUD1P3-202ENST00000508551 200 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AL117351.2-201ENST00000513571 157 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AP001858.2-201ENST00000536213 601 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC079905.1-201ENST00000549280 475 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC007448.1-201ENST00000582714 234 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC008507.3-201ENST00000585753 472 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC093765.1-201ENST00000603758 881 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 BNIP3P11-201ENST00000603878 563 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC141002.1-201ENST00000607025 279 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC092266.1-201ENST00000610958 165 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC015540.1-201ENST00000615828 501 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AL355974.3-201ENST00000617383 467 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AP000648.2-201ENST00000624182 404 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 OR5BE1P-202ENST00000641168 1176 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AL031595.2-201ENST00000624215 19071 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC114786.1-201ENST00000512892 1415 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 AC022325.1-201ENST00000502748 2199 ntBASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
TRIM55Q9BYV6 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 RNU1-49P-201ENST00000363468 159 ntBASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRIM55Q9BYV6 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms