Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.7□□□□□ -1.98
RPL39P62891 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC2.7□□□□□ -1.98
RPL39P62891 AL133247.2-201ENST00000603236 482 ntBASIC2.7□□□□□ -1.98
RPL39P62891 AL137849.1-201ENST00000604767 169 ntBASIC2.7□□□□□ -1.98
RPL39P62891 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.7□□□□□ -1.98
RPL39P62891 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RPL39P62891 U7.8-201ENST00000619968 63 ntBASIC2.7□□□□□ -1.98
RPL39P62891 AL023881.1-201ENST00000621088 301 ntBASIC2.7□□□□□ -1.98
RPL39P62891 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC2.7□□□□□ -1.98
RPL39P62891 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RPL39P62891 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
RPL39P62891 CASC19-284ENST00000642142 1868 ntBASIC2.7□□□□□ -1.98
RPL39P62891 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPL39P62891 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC2.7□□□□□ -1.98
RPL39P62891 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RPL39P62891 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RPL39P62891 AP002001.2-201ENST00000529025 1469 ntBASIC2.7□□□□□ -1.98
RPL39P62891 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC2.7□□□□□ -1.98
RPL39P62891 AC009229.4-201ENST00000623854 1947 ntBASIC2.7□□□□□ -1.98
RPL39P62891 TTC39DP-201ENST00000416781 1688 ntBASIC2.69□□□□□ -1.98
RPL39P62891 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.69□□□□□ -1.98
RPL39P62891 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RPL39P62891 RARSP1-201ENST00000542842 1418 ntBASIC2.69□□□□□ -1.98
RPL39P62891 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
RPL39P62891 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC2.69□□□□□ -1.98
RPL39P62891 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RPL39P62891 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
RPL39P62891 USP9YP4-201ENST00000424401 1745 ntBASIC2.69□□□□□ -1.98
RPL39P62891 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RPL39P62891 RPS3AP23-201ENST00000401762 784 ntBASIC2.69□□□□□ -1.98
RPL39P62891 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC2.69□□□□□ -1.98
RPL39P62891 AL445213.1-201ENST00000412589 747 ntBASIC2.69□□□□□ -1.98
RPL39P62891 AC127526.1-201ENST00000417526 366 ntBASIC2.69□□□□□ -1.98
RPL39P62891 AL590762.4-201ENST00000425885 253 ntBASIC2.69□□□□□ -1.98
RPL39P62891 RPS26P47-201ENST00000427219 348 ntBASIC2.69□□□□□ -1.98
RPL39P62891 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC2.69□□□□□ -1.98
RPL39P62891 MOB1AP1-201ENST00000430903 535 ntBASIC2.69□□□□□ -1.98
RPL39P62891 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RPL39P62891 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC2.69□□□□□ -1.98
RPL39P62891 RPL7L1P1-201ENST00000448259 785 ntBASIC2.69□□□□□ -1.98
RPL39P62891 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.69□□□□□ -1.98
RPL39P62891 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.69□□□□□ -1.98
RPL39P62891 RNA5SP179-201ENST00000517284 121 ntBASIC2.69□□□□□ -1.98
RPL39P62891 AC087369.1-201ENST00000520775 996 ntBASIC2.69□□□□□ -1.98
RPL39P62891 OR5AP1P-201ENST00000529730 940 ntBASIC2.69□□□□□ -1.98
RPL39P62891 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC2.69□□□□□ -1.98
RPL39P62891 AC091516.1-201ENST00000549191 703 ntBASIC2.69□□□□□ -1.98
RPL39P62891 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC2.69□□□□□ -1.98
RPL39P62891 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC2.69□□□□□ -1.98
RPL39P62891 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC2.69□□□□□ -1.98
RPL39P62891 CYP2C60P-201ENST00000566088 139 ntBASIC2.69□□□□□ -1.98
RPL39P62891 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC2.69□□□□□ -1.98
RPL39P62891 OR7E18P-201ENST00000592589 702 ntBASIC2.69□□□□□ -1.98
RPL39P62891 AC091167.4-201ENST00000605079 184 ntBASIC2.69□□□□□ -1.98
RPL39P62891 AC096553.1-201ENST00000605169 829 ntBASIC2.69□□□□□ -1.98
RPL39P62891 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RPL39P62891 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RPL39P62891 CCT5-215ENST00000625723 135 ntTSL 5 BASIC2.69□□□□□ -1.98
RPL39P62891 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
RPL39P62891 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RPL39P62891 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC2.69□□□□□ -1.98
RPL39P62891 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC2.69□□□□□ -1.98
RPL39P62891 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RPL39P62891 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RPL39P62891 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RPL39P62891 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC2.68□□□□□ -1.98
RPL39P62891 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
RPL39P62891 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.68□□□□□ -1.98
RPL39P62891 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.68□□□□□ -1.98
RPL39P62891 AC079741.1-201ENST00000321498 212 ntBASIC2.68□□□□□ -1.98
RPL39P62891 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RPL39P62891 MIR383-201ENST00000362257 73 ntBASIC2.68□□□□□ -1.98
RPL39P62891 RNA5SP447-201ENST00000363749 119 ntBASIC2.68□□□□□ -1.98
RPL39P62891 RNA5SP505-201ENST00000364748 108 ntBASIC2.68□□□□□ -1.98
RPL39P62891 AL035419.1-201ENST00000397037 564 ntBASIC2.68□□□□□ -1.98
RPL39P62891 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
RPL39P62891 RPS16P5-201ENST00000406501 404 ntBASIC2.68□□□□□ -1.98
RPL39P62891 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC2.68□□□□□ -1.98
RPL39P62891 TPT1P2-201ENST00000413105 503 ntBASIC2.68□□□□□ -1.98
RPL39P62891 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RPL39P62891 AC093698.1-201ENST00000423843 571 ntBASIC2.68□□□□□ -1.98
RPL39P62891 ACTR3P2-201ENST00000439585 1257 ntBASIC2.68□□□□□ -1.98
RPL39P62891 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC2.68□□□□□ -1.98
RPL39P62891 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC2.68□□□□□ -1.98
RPL39P62891 AC016724.1-201ENST00000453215 421 ntBASIC2.68□□□□□ -1.98
RPL39P62891 AL513533.1-201ENST00000453728 415 ntBASIC2.68□□□□□ -1.98
RPL39P62891 AC004801.2-202ENST00000463559 283 ntBASIC2.68□□□□□ -1.98
RPL39P62891 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC2.68□□□□□ -1.98
RPL39P62891 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC2.68□□□□□ -1.98
RPL39P62891 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC2.68□□□□□ -1.98
RPL39P62891 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC2.68□□□□□ -1.98
RPL39P62891 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RPL39P62891 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RPL39P62891 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC2.68□□□□□ -1.98
RPL39P62891 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC2.68□□□□□ -1.98
RPL39P62891 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.68□□□□□ -1.98
RPL39P62891 AC069366.1-201ENST00000583159 838 ntBASIC2.68□□□□□ -1.98
RPL39P62891 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC2.68□□□□□ -1.98
RPL39P62891 SNX6P1-201ENST00000601728 1224 ntBASIC2.68□□□□□ -1.98
RPL39P62891 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms