Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.91□□□□□ -1.14
NUBP1P53384 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC7.91□□□□□ -1.14
NUBP1P53384 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NUBP1P53384 DDX50P1-201ENST00000438163 2400 ntBASIC7.91□□□□□ -1.14
NUBP1P53384 FBXW7-205ENST00000603548 2562 ntAPPRIS P4 TSL 1 (best) BASIC7.91□□□□□ -1.14
NUBP1P53384 AC009951.1-201ENST00000623674 2614 ntBASIC7.91□□□□□ -1.14
NUBP1P53384 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
NUBP1P53384 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
NUBP1P53384 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC7.91□□□□□ -1.14
NUBP1P53384 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.14
NUBP1P53384 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
NUBP1P53384 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
NUBP1P53384 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC7.9□□□□□ -1.14
NUBP1P53384 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 AKNAD1-201ENST00000369994 2318 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
NUBP1P53384 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
NUBP1P53384 CCDC150P1-201ENST00000537123 2215 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
NUBP1P53384 DDX10P1-201ENST00000448545 1933 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 GLDN-202ENST00000396399 4584 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 ZNF234-201ENST00000426739 4551 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 AC020658.3-201ENST00000568093 4028 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
NUBP1P53384 Y_RNA.292-201ENST00000364904 97 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 RN7SKP48-201ENST00000365031 328 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 RNU6-1293P-201ENST00000384077 107 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC7.9□□□□□ -1.14
NUBP1P53384 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC7.9□□□□□ -1.14
NUBP1P53384 AC127537.1-201ENST00000418183 748 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC7.9□□□□□ -1.14
NUBP1P53384 Z92846.1-201ENST00000456203 268 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 RN7SL635P-201ENST00000492123 296 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 AC233724.10-201ENST00000510454 409 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 RNU6-352P-201ENST00000516908 107 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 MRPL40P1-201ENST00000542687 604 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7.9□□□□□ -1.14
NUBP1P53384 RPL23AP77-201ENST00000588044 463 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.9□□□□□ -1.14
NUBP1P53384 AC008555.7-201ENST00000605008 583 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 AC108706.1-201ENST00000611053 297 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 AL161931.1-201ENST00000612768 246 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 RNU6-156P-201ENST00000621869 107 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 AC073488.7-201ENST00000633785 778 ntBASIC7.9□□□□□ -1.14
NUBP1P53384 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NUBP1P53384 SCYL3-203ENST00000367772 3090 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
NUBP1P53384 PABPC4L-201ENST00000421491 4944 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.15
NUBP1P53384 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.9□□□□□ -1.15
NUBP1P53384 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
NUBP1P53384 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.15
NUBP1P53384 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
NUBP1P53384 MICB-204ENST00000538442 2411 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.15
NUBP1P53384 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
NUBP1P53384 MCTP1-201ENST00000312216 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
NUBP1P53384 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC7.9□□□□□ -1.15
NUBP1P53384 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
NUBP1P53384 AC124319.2-201ENST00000575034 3651 ntTSL 2 BASIC7.9□□□□□ -1.15
NUBP1P53384 EFHC1-226ENST00000636954 2129 ntTSL 2 BASIC7.9□□□□□ -1.15
NUBP1P53384 NCOA4-207ENST00000585132 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
NUBP1P53384 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
NUBP1P53384 KCND1-202ENST00000376477 3306 ntTSL 2 BASIC7.9□□□□□ -1.15
NUBP1P53384 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
NUBP1P53384 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
NUBP1P53384 CASC15-203ENST00000605917 4461 ntBASIC7.9□□□□□ -1.15
NUBP1P53384 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
NUBP1P53384 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
NUBP1P53384 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NUBP1P53384 FAM222B-201ENST00000341217 4033 ntTSL 5 BASIC7.89□□□□□ -1.15
NUBP1P53384 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
NUBP1P53384 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
NUBP1P53384 SRPK2-202ENST00000393651 3650 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
NUBP1P53384 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
NUBP1P53384 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NUBP1P53384 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NUBP1P53384 RN7SKP23-201ENST00000625159 4301 ntBASIC7.89□□□□□ -1.15
NUBP1P53384 AL133279.3-201ENST00000563140 2352 ntBASIC7.89□□□□□ -1.15
NUBP1P53384 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NUBP1P53384 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NUBP1P53384 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.89□□□□□ -1.15
NUBP1P53384 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
NUBP1P53384 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
NUBP1P53384 SNORD113-8-201ENST00000363497 74 ntBASIC7.89□□□□□ -1.15
NUBP1P53384 RNVU1-15-201ENST00000384476 165 ntBASIC7.89□□□□□ -1.15
NUBP1P53384 MIR191-201ENST00000384873 92 ntBASIC7.89□□□□□ -1.15
NUBP1P53384 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
NUBP1P53384 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
NUBP1P53384 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms