Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNA5SP510-201ENST00000364697 99 ntBASIC6.55□□□□□ -1.36
USP11P51784 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.55□□□□□ -1.36
USP11P51784 RNA5SP284-201ENST00000384547 118 ntBASIC6.55□□□□□ -1.36
USP11P51784 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.55□□□□□ -1.36
USP11P51784 RNU6-248P-201ENST00000410720 107 ntBASIC6.55□□□□□ -1.36
USP11P51784 RPS20P15-201ENST00000412792 311 ntBASIC6.55□□□□□ -1.36
USP11P51784 HMGB3P23-201ENST00000414981 585 ntBASIC6.55□□□□□ -1.36
USP11P51784 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.55□□□□□ -1.36
USP11P51784 AC093155.2-201ENST00000420734 937 ntBASIC6.55□□□□□ -1.36
USP11P51784 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC6.55□□□□□ -1.36
USP11P51784 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC6.55□□□□□ -1.36
USP11P51784 MTCO1P54-201ENST00000430139 712 ntBASIC6.55□□□□□ -1.36
USP11P51784 RPL12P16-201ENST00000431098 498 ntBASIC6.55□□□□□ -1.36
USP11P51784 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.55□□□□□ -1.36
USP11P51784 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.55□□□□□ -1.36
USP11P51784 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.55□□□□□ -1.36
USP11P51784 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.55□□□□□ -1.36
USP11P51784 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC6.55□□□□□ -1.36
USP11P51784 snoU13.29-201ENST00000459370 104 ntBASIC6.55□□□□□ -1.36
USP11P51784 SNORD42A-201ENST00000459584 64 ntBASIC6.55□□□□□ -1.36
USP11P51784 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.55□□□□□ -1.36
USP11P51784 PDLIM1P4-201ENST00000504327 1006 ntBASIC6.55□□□□□ -1.36
USP11P51784 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC6.55□□□□□ -1.36
USP11P51784 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC6.55□□□□□ -1.36
USP11P51784 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC6.55□□□□□ -1.36
USP11P51784 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.55□□□□□ -1.36
USP11P51784 RN7SL753P-201ENST00000581238 290 ntBASIC6.55□□□□□ -1.36
USP11P51784 MIR3614-201ENST00000581261 86 ntBASIC6.55□□□□□ -1.36
USP11P51784 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.55□□□□□ -1.36
USP11P51784 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.55□□□□□ -1.36
USP11P51784 AC010680.3-201ENST00000604215 520 ntBASIC6.55□□□□□ -1.36
USP11P51784 AL133481.2-203ENST00000607558 139 ntBASIC6.55□□□□□ -1.36
USP11P51784 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USP11P51784 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC6.55□□□□□ -1.36
USP11P51784 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
USP11P51784 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
USP11P51784 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USP11P51784 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
USP11P51784 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USP11P51784 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
USP11P51784 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
USP11P51784 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USP11P51784 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
USP11P51784 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USP11P51784 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USP11P51784 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
USP11P51784 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
USP11P51784 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USP11P51784 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
USP11P51784 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USP11P51784 Y_RNA.162-201ENST00000363683 102 ntBASIC6.54□□□□□ -1.36
USP11P51784 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.54□□□□□ -1.36
USP11P51784 LINC00993-201ENST00000420453 540 ntBASIC6.54□□□□□ -1.36
USP11P51784 AF228730.4-201ENST00000421457 183 ntBASIC6.54□□□□□ -1.36
USP11P51784 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.54□□□□□ -1.36
USP11P51784 AC006065.1-201ENST00000422539 802 ntBASIC6.54□□□□□ -1.36
USP11P51784 AC127526.2-201ENST00000426436 775 ntBASIC6.54□□□□□ -1.36
USP11P51784 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.54□□□□□ -1.36
USP11P51784 HMGB3P24-201ENST00000433260 622 ntBASIC6.54□□□□□ -1.36
USP11P51784 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.54□□□□□ -1.36
USP11P51784 ARPC3P1-201ENST00000437218 533 ntBASIC6.54□□□□□ -1.36
USP11P51784 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USP11P51784 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.54□□□□□ -1.36
USP11P51784 RPS26P30-201ENST00000443431 335 ntBASIC6.54□□□□□ -1.36
USP11P51784 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC6.54□□□□□ -1.36
USP11P51784 OR7E116P-201ENST00000448529 957 ntBASIC6.54□□□□□ -1.36
USP11P51784 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.54□□□□□ -1.36
USP11P51784 AC022215.1-201ENST00000481770 362 ntBASIC6.54□□□□□ -1.36
USP11P51784 AC073610.1-201ENST00000489971 396 ntBASIC6.54□□□□□ -1.36
USP11P51784 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.54□□□□□ -1.36
USP11P51784 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USP11P51784 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.54□□□□□ -1.36
USP11P51784 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC6.54□□□□□ -1.36
USP11P51784 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.54□□□□□ -1.36
USP11P51784 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC6.54□□□□□ -1.36
USP11P51784 OR5AQ1P-201ENST00000527596 927 ntBASIC6.54□□□□□ -1.36
USP11P51784 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.54□□□□□ -1.36
USP11P51784 NPM1P42-201ENST00000560329 862 ntBASIC6.54□□□□□ -1.36
USP11P51784 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.54□□□□□ -1.36
USP11P51784 MIR3913-1-201ENST00000577744 102 ntBASIC6.54□□□□□ -1.36
USP11P51784 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.54□□□□□ -1.36
USP11P51784 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC6.54□□□□□ -1.36
USP11P51784 AC103792.1-201ENST00000603591 919 ntBASIC6.54□□□□□ -1.36
USP11P51784 AC241377.1-201ENST00000619797 406 ntBASIC6.54□□□□□ -1.36
USP11P51784 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.54□□□□□ -1.36
USP11P51784 AC120349.2-201ENST00000625002 298 ntBASIC6.54□□□□□ -1.36
USP11P51784 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.54□□□□□ -1.36
USP11P51784 VPS8-228ENST00000628962 207 ntTSL 5 BASIC6.54□□□□□ -1.36
USP11P51784 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.54□□□□□ -1.36
USP11P51784 MIR193BHG-214ENST00000641765 509 ntBASIC6.54□□□□□ -1.36
USP11P51784 AL034546.1-201ENST00000623740 3693 ntBASIC6.54□□□□□ -1.36
USP11P51784 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
USP11P51784 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.54□□□□□ -1.36
USP11P51784 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USP11P51784 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
USP11P51784 AL355834.1-201ENST00000556602 3965 ntBASIC6.54□□□□□ -1.36
USP11P51784 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.54□□□□□ -1.36
USP11P51784 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
USP11P51784 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USP11P51784 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms