Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.72□□□□□ -1.33
CFTRP13569 AL451044.1-201ENST00000604867 238 ntBASIC6.72□□□□□ -1.33
CFTRP13569 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.71□□□□□ -1.33
CFTRP13569 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CFTRP13569 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CFTRP13569 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
CFTRP13569 RNU1-33P-201ENST00000364249 162 ntBASIC6.71□□□□□ -1.34
CFTRP13569 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.71□□□□□ -1.34
CFTRP13569 AL390879.2-203ENST00000426943 1121 ntBASIC6.71□□□□□ -1.34
CFTRP13569 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC6.71□□□□□ -1.34
CFTRP13569 AL031584.1-201ENST00000447169 754 ntBASIC6.71□□□□□ -1.34
CFTRP13569 AC112206.1-201ENST00000468416 477 ntBASIC6.71□□□□□ -1.34
CFTRP13569 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC6.71□□□□□ -1.34
CFTRP13569 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.71□□□□□ -1.34
CFTRP13569 DEFB109D-201ENST00000529497 240 ntBASIC6.71□□□□□ -1.34
CFTRP13569 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.71□□□□□ -1.34
CFTRP13569 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC6.71□□□□□ -1.34
CFTRP13569 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.71□□□□□ -1.34
CFTRP13569 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.71□□□□□ -1.34
CFTRP13569 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.71□□□□□ -1.34
CFTRP13569 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CFTRP13569 AC007529.1-201ENST00000418574 2178 ntBASIC6.7□□□□□ -1.34
CFTRP13569 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CFTRP13569 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CFTRP13569 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
CFTRP13569 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.7□□□□□ -1.34
CFTRP13569 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
CFTRP13569 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.7□□□□□ -1.34
CFTRP13569 HIST1H2APS3-201ENST00000403259 134 ntBASIC6.7□□□□□ -1.34
CFTRP13569 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.7□□□□□ -1.34
CFTRP13569 HIGD1AP4-201ENST00000430194 280 ntBASIC6.7□□□□□ -1.34
CFTRP13569 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.7□□□□□ -1.34
CFTRP13569 SETP6-201ENST00000479329 568 ntBASIC6.7□□□□□ -1.34
CFTRP13569 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC6.7□□□□□ -1.34
CFTRP13569 RNU1-103P-201ENST00000516502 125 ntBASIC6.7□□□□□ -1.34
CFTRP13569 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.7□□□□□ -1.34
CFTRP13569 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC6.7□□□□□ -1.34
CFTRP13569 AC006960.3-201ENST00000561845 705 ntBASIC6.7□□□□□ -1.34
CFTRP13569 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC6.7□□□□□ -1.34
CFTRP13569 AC079171.1-201ENST00000568788 914 ntBASIC6.7□□□□□ -1.34
CFTRP13569 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.7□□□□□ -1.34
CFTRP13569 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.7□□□□□ -1.34
CFTRP13569 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.7□□□□□ -1.34
CFTRP13569 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC6.7□□□□□ -1.34
CFTRP13569 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CFTRP13569 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
CFTRP13569 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CFTRP13569 RPL7P60-201ENST00000397636 735 ntBASIC6.69□□□□□ -1.34
CFTRP13569 AC097713.2-201ENST00000430199 356 ntBASIC6.69□□□□□ -1.34
CFTRP13569 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.69□□□□□ -1.34
CFTRP13569 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.69□□□□□ -1.34
CFTRP13569 HMGN1P11-201ENST00000508668 303 ntBASIC6.69□□□□□ -1.34
CFTRP13569 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.69□□□□□ -1.34
CFTRP13569 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.69□□□□□ -1.34
CFTRP13569 RN7SKP57-201ENST00000517248 293 ntBASIC6.69□□□□□ -1.34
CFTRP13569 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.69□□□□□ -1.34
CFTRP13569 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.69□□□□□ -1.34
CFTRP13569 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
CFTRP13569 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
CFTRP13569 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.69□□□□□ -1.34
CFTRP13569 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CFTRP13569 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CFTRP13569 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CFTRP13569 AL513548.1-201ENST00000562904 1724 ntBASIC6.68□□□□□ -1.34
CFTRP13569 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CFTRP13569 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC6.68□□□□□ -1.34
CFTRP13569 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC6.68□□□□□ -1.34
CFTRP13569 SKP1P3-201ENST00000429280 487 ntBASIC6.68□□□□□ -1.34
CFTRP13569 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.68□□□□□ -1.34
CFTRP13569 RPL6P9-201ENST00000466502 859 ntBASIC6.68□□□□□ -1.34
CFTRP13569 AC138938.1-201ENST00000515431 782 ntBASIC6.68□□□□□ -1.34
CFTRP13569 AC027807.1-201ENST00000559921 996 ntBASIC6.68□□□□□ -1.34
CFTRP13569 GTF2IP8-201ENST00000560687 584 ntBASIC6.68□□□□□ -1.34
CFTRP13569 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.68□□□□□ -1.34
CFTRP13569 AC000374.1-201ENST00000434698 1745 ntBASIC6.68□□□□□ -1.34
CFTRP13569 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
CFTRP13569 OR6K3-202ENST00000368146 996 ntBASIC6.67□□□□□ -1.34
CFTRP13569 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.67□□□□□ -1.34
CFTRP13569 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.67□□□□□ -1.34
CFTRP13569 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CFTRP13569 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.67□□□□□ -1.34
CFTRP13569 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.67□□□□□ -1.34
CFTRP13569 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.67□□□□□ -1.34
CFTRP13569 AC244258.1-201ENST00000637553 1071 ntBASIC6.67□□□□□ -1.34
CFTRP13569 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CFTRP13569 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC6.67□□□□□ -1.34
CFTRP13569 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CFTRP13569 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CFTRP13569 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CFTRP13569 AC234772.1-201ENST00000377927 937 ntBASIC6.66□□□□□ -1.34
CFTRP13569 BOLA3P4-201ENST00000418151 400 ntBASIC6.66□□□□□ -1.34
CFTRP13569 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.66□□□□□ -1.34
CFTRP13569 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6.66□□□□□ -1.34
CFTRP13569 RPL5P24-201ENST00000463742 885 ntBASIC6.66□□□□□ -1.34
CFTRP13569 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CFTRP13569 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC6.66□□□□□ -1.34
CFTRP13569 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC6.66□□□□□ -1.34
CFTRP13569 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CFTRP13569 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
CFTRP13569 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms