Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 Z95331.1-201ENST00000623075 23112 ntBASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPC1L1Q9UHC9 AC108032.1-201ENST00000416706 207 ntBASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 AC073587.1-201ENST00000447093 876 ntBASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 AL133372.1-201ENST00000493565 745 ntBASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 AC025554.1-201ENST00000505641 188 ntBASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 AC108064.1-201ENST00000513791 460 ntBASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 AC025423.2-201ENST00000537570 439 ntBASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 BTBD10P1-201ENST00000549824 1352 ntBASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 AC005005.4-201ENST00000623789 16698 ntBASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.56□□□□□ -1.52
NPC1L1Q9UHC9 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 RNA5SP513-201ENST00000364648 118 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 PGBD4P8-201ENST00000412993 562 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AC234781.4-201ENST00000419384 244 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 RCC2P2-201ENST00000422174 918 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 HSFY6P-201ENST00000445573 403 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 MTND4LP12-201ENST00000448237 295 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AL132838.2-201ENST00000492041 314 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 OR8R1P-201ENST00000543943 764 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AC008126.1-201ENST00000549019 480 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AL669942.2-201ENST00000620352 697 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 RNA5SP171-201ENST00000391071 115 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 RPS24P12-201ENST00000402084 394 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 PPIAP31-201ENST00000405422 495 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 HSPE1P12-201ENST00000412576 301 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AL451062.2-201ENST00000427515 271 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AC083863.1-201ENST00000438811 231 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 RPS7P7-201ENST00000463499 571 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AC022882.1-201ENST00000532142 501 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AC079171.1-201ENST00000568788 914 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AC010615.3-201ENST00000597319 394 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 AL451049.1-201ENST00000608672 497 ntBASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NPC1L1Q9UHC9 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 CDC27P2-201ENST00000425026 1922 ntBASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 NAMPTP1-201ENST00000440465 2514 ntBASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 CASC19-261ENST00000641853 1638 ntBASIC5.54□□□□□ -1.52
NPC1L1Q9UHC9 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms