Protein–RNA interactions for Protein: Q9H1Y3

OPN3, Opsin-3, humanhuman

Predicted RBP Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3Q9H1Y3 AC013356.1-201ENST00000489027 564 ntBASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 RPL36AP41-201ENST00000493820 306 ntBASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 MTND4LP2-201ENST00000502312 285 ntBASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 RNU6-1308P-201ENST00000516817 103 ntBASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 HIGD1AP18-201ENST00000520730 278 ntBASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 CYCSP40-201ENST00000575927 294 ntBASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 AC069061.3-201ENST00000582254 823 ntBASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 PSMA6P4-201ENST00000603247 718 ntBASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 AL133338.2-201ENST00000604292 736 ntBASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 AL139286.1-201ENST00000604465 483 ntBASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 AC025016.1-201ENST00000616746 682 ntBASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 AL049536.1-201ENST00000625043 744 ntBASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 ZNF137P-201ENST00000456718 1920 ntBASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 AL137100.1-201ENST00000556703 1620 ntBASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 AC107068.1-201ENST00000563286 4218 ntBASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 AC134882.1-201ENST00000603738 1676 ntBASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
OPN3Q9H1Y3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC139713.2-214ENST00000642059 1811 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AL592148.3-201ENST00000608771 2646 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 IL6STP1-201ENST00000346911 1020 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 RPL32P3-201ENST00000359025 275 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 MIR129-1-201ENST00000384972 72 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 U3.22-201ENST00000391120 215 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 Z98745.1-201ENST00000402553 494 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 RNU2-72P-201ENST00000411175 163 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 RAB28P1-201ENST00000411517 641 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AL160275.2-201ENST00000412010 394 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 TRGV6-201ENST00000417928 299 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC010469.1-201ENST00000463864 576 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 CABYRP1-201ENST00000465493 1045 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC021205.1-201ENST00000468797 348 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC108729.2-201ENST00000476543 840 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC090686.1-201ENST00000481577 749 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC093663.2-201ENST00000484625 313 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 SUMO1P1-201ENST00000497904 306 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC034205.1-201ENST00000520621 638 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC009643.1-201ENST00000532030 391 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC023158.1-201ENST00000561632 1025 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 MIR4277-201ENST00000578298 84 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 MIR4284-201ENST00000578924 81 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 RPL21P136-201ENST00000605378 396 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC100847.1-201ENST00000611316 481 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC000123.2-201ENST00000623124 461 ntBASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
OPN3Q9H1Y3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
OPN3Q9H1Y3 AC024341.1-201ENST00000526444 1552 ntBASIC4.1□□□□□ -1.75
OPN3Q9H1Y3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
OPN3Q9H1Y3 AL139811.1-201ENST00000424779 2299 ntBASIC4.1□□□□□ -1.75
OPN3Q9H1Y3 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
OPN3Q9H1Y3 ZFRP1-201ENST00000457579 2970 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 310.2 ms