Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SNTG1-207ENST00000522124 3504 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC010132.2-201ENST00000295493 1043 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 RN7SKP47-201ENST00000365347 328 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC013404.1-201ENST00000413068 249 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC234782.4-201ENST00000417646 1048 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 RAC1P6-201ENST00000423911 575 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC007559.1-201ENST00000428736 355 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 RPEP2-201ENST00000432149 701 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 NRBF2P3-201ENST00000432731 865 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC006466.1-201ENST00000438721 289 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 RPS23P9-201ENST00000448848 438 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AL136981.1-203ENST00000451452 3844 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 MRPS31P2-201ENST00000451581 518 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 MTND5P30-201ENST00000452896 1731 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 SLC4A8-203ENST00000453097 11824 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 MTCO1P42-201ENST00000457379 726 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC010307.1-201ENST00000467206 836 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 RN7SL604P-201ENST00000492589 296 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 RNU6-976P-201ENST00000516086 111 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC022868.1-201ENST00000517767 391 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC022861.1-201ENST00000522981 663 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 SLC2A13P1-201ENST00000531560 322 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AL110118.1-201ENST00000553543 400 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC138915.2-201ENST00000569776 97 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 ATP1B3P1-201ENST00000605365 821 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 LINC02019-201ENST00000608605 2060 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 AC096861.1-201ENST00000616652 240 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL25A1Q9BXS0 ZNF225-206ENST00000592780 2538 ntTSL 5 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AC010401.2-201ENST00000575137 4934 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 WDR78-203ENST00000371026 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 MIR375-201ENST00000362103 64 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 Y_RNA.5-201ENST00000362334 102 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 Y_RNA.301-201ENST00000364990 103 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AL583835.1-201ENST00000399570 407 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 Y_RNA.615-201ENST00000410769 117 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 RNU6-370P-201ENST00000411008 104 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AC127391.1-201ENST00000411737 98 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 RAC1P4-201ENST00000419413 579 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms