Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC006539.2-201ENST00000601729 572 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC018618.2-201ENST00000604770 446 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC069545.1-201ENST00000605671 358 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AL451049.1-201ENST00000608672 497 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC109583.2-201ENST00000617367 129 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 AC073869.8-201ENST00000641806 335 ntBASIC5.65□□□□□ -1.5
CDK5RAP1Q96SZ6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDK5RAP1Q96SZ6 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDK5RAP1Q96SZ6 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.65□□□□□ -1.51
CDK5RAP1Q96SZ6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
CDK5RAP1Q96SZ6 AC073429.2-201ENST00000569694 1444 ntBASIC5.65□□□□□ -1.51
CDK5RAP1Q96SZ6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.65□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 MTND5P11-201ENST00000511037 1812 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 AL590763.1-201ENST00000398297 1545 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 RNU6-757P-201ENST00000410334 100 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 RNU2-66P-201ENST00000410650 161 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 RPS7P9-201ENST00000414704 586 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 MTCYBP38-201ENST00000417160 1123 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 USP9YP31-201ENST00000431405 881 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 AC091862.1-201ENST00000438016 1100 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 AC023271.1-201ENST00000445936 1090 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 KATNBL1P6-201ENST00000453433 915 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 RN7SL172P-201ENST00000460535 303 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 MTND2P33-201ENST00000506452 1031 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 HMGB3P13-201ENST00000511263 607 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 RNU6-507P-201ENST00000516045 100 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 RNA5SP303-201ENST00000516192 130 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 AP005639.2-201ENST00000527592 928 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 AC099654.6-201ENST00000636487 512 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 AC138907.8-201ENST00000623981 2256 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 PABPC1P6-201ENST00000445594 1829 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 MTND4P16-201ENST00000466108 1367 ntBASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK5RAP1Q96SZ6 ZNF733P-202ENST00000444809 1573 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 MTND5P23-201ENST00000430812 1655 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AL603750.1-201ENST00000624216 1717 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC026523.2-201ENST00000625039 7739 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 OR9K1P-201ENST00000326513 941 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 U3.7-201ENST00000363668 216 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 DBIP1-201ENST00000401435 260 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 HSPA8P15-201ENST00000401676 786 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 FNDC3CP-201ENST00000420795 1155 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 BX510359.3-201ENST00000422168 306 ntBASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.63□□□□□ -1.51
CDK5RAP1Q96SZ6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms