Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.17□□□□□ -1.9
AP1S3Q96PC3 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.17□□□□□ -1.9
AP1S3Q96PC3 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
AP1S3Q96PC3 CFTRP2-201ENST00000634304 199 ntBASIC3.17□□□□□ -1.9
AP1S3Q96PC3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.17□□□□□ -1.9
AP1S3Q96PC3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
AP1S3Q96PC3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
AP1S3Q96PC3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
AP1S3Q96PC3 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.17□□□□□ -1.9
AP1S3Q96PC3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
AP1S3Q96PC3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
AP1S3Q96PC3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
AP1S3Q96PC3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
AP1S3Q96PC3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 OR11H4-201ENST00000315409 1082 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AL590240.1-201ENST00000334118 313 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 RNA5SP191-201ENST00000362585 102 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 RNA5SP435-201ENST00000364044 108 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 MIR1179-201ENST00000408703 91 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 HMGB1P32-201ENST00000425971 565 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 RPEP2-201ENST00000432149 701 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 RPS26P40-201ENST00000435209 294 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AC114495.1-201ENST00000441274 436 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 RPL23AP43-201ENST00000446445 471 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 RAD23BP3-201ENST00000454157 1152 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 MTCO3P20-201ENST00000454926 688 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AL136097.1-201ENST00000456945 913 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 RPL7AP52-201ENST00000458096 790 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AC005532.2-201ENST00000467154 373 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AC010307.1-201ENST00000467206 836 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AC006517.1-201ENST00000480485 328 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 TRBV8-1-201ENST00000481590 279 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 RN7SL101P-201ENST00000496350 279 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 FTH1P9-201ENST00000513251 355 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AC005000.1-201ENST00000536192 288 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 TOMM20P2-201ENST00000540082 421 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 MTND2P13-201ENST00000577438 1039 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AL049634.3-201ENST00000604968 457 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 AL391261.4-201ENST00000616012 481 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 BDP1P-201ENST00000582658 1990 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.16□□□□□ -1.9
AP1S3Q96PC3 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.16□□□□□ -1.9
AP1S3Q96PC3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
AP1S3Q96PC3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
AP1S3Q96PC3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
AP1S3Q96PC3 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 SNORA3C-201ENST00000408792 125 ntBASIC3.15□□□□□ -1.91
AP1S3Q96PC3 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 YWHAZP2-201ENST00000440317 728 ntBASIC3.15□□□□□ -1.91
AP1S3Q96PC3 EEF1B2P5-201ENST00000444820 548 ntBASIC3.15□□□□□ -1.91
AP1S3Q96PC3 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 AC008802.1-201ENST00000519121 791 ntBASIC3.15□□□□□ -1.91
AP1S3Q96PC3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.15□□□□□ -1.91
AP1S3Q96PC3 HMGN2P6-201ENST00000551091 273 ntBASIC3.15□□□□□ -1.91
AP1S3Q96PC3 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms