Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC010338.1-201ENST00000621823 717 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC112204.3-201ENST00000623822 332 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC068880.5-201ENST00000624331 290 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AP003400.3-201ENST00000624904 346 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC073488.6-201ENST00000632293 754 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 THAP12P9-201ENST00000503971 2360 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP43Q8NFH3 AC068870.3-201ENST00000625077 2536 ntBASIC5.64□□□□□ -1.51
NUP43Q8NFH3 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC130360.2-201ENST00000533477 1556 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AP003486.1-201ENST00000525716 3994 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AL161901.1-201ENST00000624954 3425 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AL137141.1-201ENST00000624622 4836 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 DBF4P1-201ENST00000412976 1892 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 RNU6-216P-201ENST00000363282 104 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 Y_RNA.263-201ENST00000364659 114 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 RPS3AP36-201ENST00000398190 775 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AL450338.1-201ENST00000407987 512 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 MIR1282-201ENST00000408865 101 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 RPL7P56-201ENST00000429441 717 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 GAPDHP59-201ENST00000435908 267 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 FTLP8-201ENST00000446770 267 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 HMGB1P7-201ENST00000450921 612 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 SLC31A1P1-201ENST00000451221 567 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 RPL26P28-201ENST00000451325 435 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC012170.1-201ENST00000495139 359 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 RN7SKP288-201ENST00000516227 268 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 RNU6-1153P-201ENST00000516760 105 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 IGKV2D-10-201ENST00000520194 281 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC022878.1-201ENST00000530684 149 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC141257.3-201ENST00000572906 215 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC103710.4-201ENST00000609301 899 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 MIR6721-201ENST00000617181 87 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 IFIT1P1-201ENST00000400497 1449 ntBASIC5.63□□□□□ -1.51
NUP43Q8NFH3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
NUP43Q8NFH3 AC006026.1-201ENST00000444025 1803 ntBASIC5.62□□□□□ -1.51
NUP43Q8NFH3 AC046144.1-201ENST00000478559 1853 ntBASIC5.62□□□□□ -1.51
NUP43Q8NFH3 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP43Q8NFH3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
NUP43Q8NFH3 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP43Q8NFH3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP43Q8NFH3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP43Q8NFH3 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.62□□□□□ -1.51
NUP43Q8NFH3 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP43Q8NFH3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
NUP43Q8NFH3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.62□□□□□ -1.51
NUP43Q8NFH3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP43Q8NFH3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP43Q8NFH3 IGKV7-3-201ENST00000357453 298 ntBASIC5.62□□□□□ -1.51
NUP43Q8NFH3 RNA5SP279-201ENST00000365513 117 ntBASIC5.62□□□□□ -1.51
NUP43Q8NFH3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP43Q8NFH3 U8.14-201ENST00000390843 143 ntBASIC5.62□□□□□ -1.51
NUP43Q8NFH3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
NUP43Q8NFH3 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP43Q8NFH3 RNU4-55P-201ENST00000410731 137 ntBASIC5.62□□□□□ -1.51
NUP43Q8NFH3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms