Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 AC083899.3-201ENST00000603413 594 ntBASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 NDUFA8P1-201ENST00000605525 367 ntBASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 AP001437.1-201ENST00000608783 456 ntBASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 AC092266.1-201ENST00000610958 165 ntBASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 AL021918.2-201ENST00000613415 194 ntBASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 AC015804.1-201ENST00000622935 435 ntBASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 SAMMSON-209ENST00000641222 1100 ntBASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PIK3C3Q8NEB9 ASNSP1-204ENST00000641977 1664 ntBASIC5.34□□□□□ -1.56
PIK3C3Q8NEB9 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PIK3C3Q8NEB9 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 CDR1-202ENST00000625883 1485 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AL078621.3-201ENST00000623707 2042 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AC104964.3-201ENST00000606115 2860 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AC092681.1-201ENST00000297369 291 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 RNU1-146P-201ENST00000364015 165 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 RN7SKP187-201ENST00000365536 330 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 SNORA51.9-201ENST00000384295 124 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 Y_RNA.516-201ENST00000384541 124 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AL133264.1-201ENST00000407157 562 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 MIR1284-201ENST00000408337 120 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AC099535.1-201ENST00000408928 371 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AC073069.1-201ENST00000428657 441 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AC002069.1-201ENST00000429649 1159 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 PNKDP1-201ENST00000435914 430 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AL031667.1-201ENST00000440222 725 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 LINC02210-201ENST00000444561 288 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AL592447.1-201ENST00000447592 540 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 RPL23AP71-201ENST00000470966 469 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AC099521.1-201ENST00000482557 334 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 COX6B1P2-201ENST00000489624 230 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 MTCO1P30-201ENST00000515244 580 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 COX6B1P6-201ENST00000522347 255 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 OR6C7P-201ENST00000547875 934 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 NPM1P47-201ENST00000560843 856 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AC087481.2-201ENST00000565492 330 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AL512347.1-201ENST00000566420 503 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 Z99129.1-201ENST00000612510 255 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AC245014.3-201ENST00000618589 347 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 ATE1-AS1-202ENST00000636460 506 ntBASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PIK3C3Q8NEB9 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PIK3C3Q8NEB9 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PIK3C3Q8NEB9 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PIK3C3Q8NEB9 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PIK3C3Q8NEB9 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.32□□□□□ -1.56
PIK3C3Q8NEB9 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PIK3C3Q8NEB9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PIK3C3Q8NEB9 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.32□□□□□ -1.56
PIK3C3Q8NEB9 AC008627.1-201ENST00000517511 1704 ntBASIC5.32□□□□□ -1.56
PIK3C3Q8NEB9 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.32□□□□□ -1.56
PIK3C3Q8NEB9 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PIK3C3Q8NEB9 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.32□□□□□ -1.56
PIK3C3Q8NEB9 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PIK3C3Q8NEB9 COX6B1P3-201ENST00000312310 260 ntBASIC5.32□□□□□ -1.56
PIK3C3Q8NEB9 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PIK3C3Q8NEB9 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.32□□□□□ -1.56
PIK3C3Q8NEB9 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms