Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4DQ86TL0 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 RNU1-65P-201ENST00000363919 148 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 SNORD42.2-201ENST00000365570 69 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 Y_RNA.381-201ENST00000365666 102 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 PRELID1P1-201ENST00000403549 660 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 RN7SKP32-201ENST00000410167 303 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 RN7SKP86-201ENST00000410454 332 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 RNA5SP251-201ENST00000410614 137 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC013404.1-201ENST00000413068 249 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 RPL35AP24-201ENST00000413846 330 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 PIGFP2-201ENST00000421400 651 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 GAPDHP59-201ENST00000435908 267 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 MTND2P29-201ENST00000438595 412 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 CBWD4P-201ENST00000445695 655 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 TIMM8BP2-201ENST00000445940 251 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 RPL23AP20-201ENST00000447965 421 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC104306.1-201ENST00000449702 371 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 RANP2-201ENST00000456833 229 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 Y_RNA.631-201ENST00000459607 101 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC091564.1-201ENST00000464563 479 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC112206.1-201ENST00000468416 477 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 RPL12P31-201ENST00000478433 450 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC005017.1-201ENST00000482002 490 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC112484.3-201ENST00000505910 329 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 Y_RNA.711-201ENST00000516993 102 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 RPA2P3-201ENST00000533268 770 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AP003034.1-201ENST00000534621 422 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 RPL21P5-201ENST00000554662 472 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AL049870.4-201ENST00000555741 486 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC011840.5-201ENST00000582125 771 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC068831.8-201ENST00000620171 435 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC015908.5-201ENST00000623289 343 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 RLIMP2-201ENST00000427891 1563 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC015689.2-201ENST00000528172 1738 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
ATG4DQ86TL0 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC096921.2-201ENST00000561507 1916 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 AC010401.2-201ENST00000575137 4934 ntBASIC5.7□□□□□ -1.5
ATG4DQ86TL0 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 HDAC1P2-201ENST00000453661 1398 ntBASIC5.69□□□□□ -1.5
ATG4DQ86TL0 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.69□□□□□ -1.5
ATG4DQ86TL0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms