Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDH12P55289 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH12P55289 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CDH12P55289 PANDAR-201ENST00000629595 1506 ntBASIC4.62□□□□□ -1.67
CDH12P55289 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH12P55289 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH12P55289 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.62□□□□□ -1.67
CDH12P55289 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDH12P55289 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH12P55289 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CDH12P55289 TTC39DP-201ENST00000416781 1688 ntBASIC4.62□□□□□ -1.67
CDH12P55289 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH12P55289 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CDH12P55289 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH12P55289 OR5H2-201ENST00000355273 945 ntBASIC4.62□□□□□ -1.67
CDH12P55289 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CDH12P55289 SNORA73.1-201ENST00000363107 205 ntBASIC4.62□□□□□ -1.67
CDH12P55289 snoZ40.1-201ENST00000364540 72 ntBASIC4.62□□□□□ -1.67
CDH12P55289 RNU1-43P-201ENST00000365052 165 ntBASIC4.62□□□□□ -1.67
CDH12P55289 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
CDH12P55289 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH12P55289 RNU6-413P-201ENST00000384115 107 ntBASIC4.62□□□□□ -1.67
CDH12P55289 MIR525-201ENST00000384978 85 ntBASIC4.62□□□□□ -1.67
CDH12P55289 SFR1P1-201ENST00000403720 688 ntBASIC4.62□□□□□ -1.67
CDH12P55289 SNORA11.5-201ENST00000408163 128 ntBASIC4.62□□□□□ -1.67
CDH12P55289 RNU6-575P-201ENST00000411326 105 ntBASIC4.62□□□□□ -1.67
CDH12P55289 NPM1P4-201ENST00000414095 812 ntBASIC4.62□□□□□ -1.67
CDH12P55289 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH12P55289 OR5AW1P-201ENST00000426334 1006 ntBASIC4.62□□□□□ -1.67
CDH12P55289 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.62□□□□□ -1.67
CDH12P55289 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH12P55289 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH12P55289 BX323845.1-201ENST00000432417 179 ntBASIC4.62□□□□□ -1.67
CDH12P55289 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH12P55289 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH12P55289 AL450023.3-201ENST00000440592 271 ntBASIC4.62□□□□□ -1.67
CDH12P55289 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH12P55289 EXTL2P1-201ENST00000446218 416 ntBASIC4.62□□□□□ -1.67
CDH12P55289 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.62□□□□□ -1.67
CDH12P55289 Z99714.1-201ENST00000450463 807 ntBASIC4.62□□□□□ -1.67
CDH12P55289 AL935212.3-201ENST00000450729 284 ntBASIC4.62□□□□□ -1.67
CDH12P55289 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH12P55289 NECAP1P2-201ENST00000455668 727 ntBASIC4.62□□□□□ -1.67
CDH12P55289 AC011225.1-201ENST00000457751 369 ntBASIC4.62□□□□□ -1.67
CDH12P55289 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.62□□□□□ -1.67
CDH12P55289 AC112206.1-201ENST00000468416 477 ntBASIC4.62□□□□□ -1.67
CDH12P55289 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH12P55289 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH12P55289 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH12P55289 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH12P55289 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDH12P55289 AC117522.2-201ENST00000510049 657 ntBASIC4.62□□□□□ -1.67
CDH12P55289 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH12P55289 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH12P55289 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH12P55289 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.62□□□□□ -1.67
CDH12P55289 AC125612.1-201ENST00000547580 377 ntBASIC4.62□□□□□ -1.67
CDH12P55289 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH12P55289 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CDH12P55289 AC044913.1-201ENST00000557200 430 ntBASIC4.62□□□□□ -1.67
CDH12P55289 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.62□□□□□ -1.67
CDH12P55289 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.62□□□□□ -1.67
CDH12P55289 NIFKP8-201ENST00000560500 874 ntBASIC4.62□□□□□ -1.67
CDH12P55289 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.62□□□□□ -1.67
CDH12P55289 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH12P55289 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH12P55289 EIF1P6-201ENST00000600054 334 ntBASIC4.62□□□□□ -1.67
CDH12P55289 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH12P55289 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH12P55289 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH12P55289 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH12P55289 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDH12P55289 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH12P55289 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH12P55289 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDH12P55289 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH12P55289 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH12P55289 AC097461.1-201ENST00000568928 2821 ntBASIC4.62□□□□□ -1.67
CDH12P55289 RBPJP2-201ENST00000618187 1444 ntBASIC4.62□□□□□ -1.67
CDH12P55289 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
CDH12P55289 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH12P55289 SOCS5P3-201ENST00000425115 1576 ntBASIC4.61□□□□□ -1.67
CDH12P55289 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH12P55289 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CDH12P55289 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH12P55289 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH12P55289 RNF6P1-201ENST00000444889 1784 ntBASIC4.61□□□□□ -1.67
CDH12P55289 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH12P55289 NEAT1-202ENST00000501122 22743 ntBASIC4.61□□□□□ -1.67
CDH12P55289 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH12P55289 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH12P55289 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH12P55289 RN7SKP162-201ENST00000363605 345 ntBASIC4.61□□□□□ -1.67
CDH12P55289 Y_RNA.169-201ENST00000363745 96 ntBASIC4.61□□□□□ -1.67
CDH12P55289 SNORA70.10-201ENST00000384515 134 ntBASIC4.61□□□□□ -1.67
CDH12P55289 U3.25-201ENST00000391209 220 ntBASIC4.61□□□□□ -1.67
CDH12P55289 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CDH12P55289 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH12P55289 DUTP5-201ENST00000406790 469 ntBASIC4.61□□□□□ -1.67
CDH12P55289 SNORA77-201ENST00000408716 125 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms