Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 RPS7P2-201ENST00000435134 607 ntBASIC4.93□□□□□ -1.62
HADHAP40939 RHOT1P3-201ENST00000436571 331 ntBASIC4.93□□□□□ -1.62
HADHAP40939 RPS26P2-201ENST00000440331 348 ntBASIC4.93□□□□□ -1.62
HADHAP40939 AC009263.1-201ENST00000441193 1239 ntBASIC4.93□□□□□ -1.62
HADHAP40939 YWHAQP9-201ENST00000445891 512 ntBASIC4.93□□□□□ -1.62
HADHAP40939 EEF1A1P1-201ENST00000447052 739 ntBASIC4.93□□□□□ -1.62
HADHAP40939 RPL7P61-201ENST00000451721 751 ntBASIC4.93□□□□□ -1.62
HADHAP40939 Z95152.1-201ENST00000453556 656 ntBASIC4.93□□□□□ -1.62
HADHAP40939 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.93□□□□□ -1.62
HADHAP40939 AC010683.1-201ENST00000473673 378 ntBASIC4.93□□□□□ -1.62
HADHAP40939 CDH12P4-201ENST00000517835 295 ntBASIC4.93□□□□□ -1.62
HADHAP40939 CDH12P3-201ENST00000517935 295 ntBASIC4.93□□□□□ -1.62
HADHAP40939 CDH12P1-201ENST00000518435 295 ntBASIC4.93□□□□□ -1.62
HADHAP40939 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.93□□□□□ -1.62
HADHAP40939 AP001922.4-201ENST00000526967 290 ntBASIC4.93□□□□□ -1.62
HADHAP40939 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.93□□□□□ -1.62
HADHAP40939 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.93□□□□□ -1.62
HADHAP40939 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.93□□□□□ -1.62
HADHAP40939 NTAN1P1-201ENST00000603150 646 ntBASIC4.93□□□□□ -1.62
HADHAP40939 MEMO1P5-201ENST00000604810 406 ntBASIC4.93□□□□□ -1.62
HADHAP40939 AC005084.1-201ENST00000605160 304 ntBASIC4.93□□□□□ -1.62
HADHAP40939 AC017076.1-201ENST00000607613 578 ntBASIC4.93□□□□□ -1.62
HADHAP40939 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.93□□□□□ -1.62
HADHAP40939 AC091905.4-201ENST00000623432 202 ntBASIC4.93□□□□□ -1.62
HADHAP40939 ATE1-AS1-202ENST00000636460 506 ntBASIC4.93□□□□□ -1.62
HADHAP40939 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.93□□□□□ -1.62
HADHAP40939 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HADHAP40939 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HADHAP40939 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
HADHAP40939 MTND4P9-201ENST00000507819 1346 ntBASIC4.93□□□□□ -1.62
HADHAP40939 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
HADHAP40939 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HADHAP40939 Z73965.1-201ENST00000623412 2297 ntBASIC4.93□□□□□ -1.62
HADHAP40939 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.92□□□□□ -1.62
HADHAP40939 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.92□□□□□ -1.62
HADHAP40939 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HADHAP40939 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HADHAP40939 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HADHAP40939 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
HADHAP40939 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
HADHAP40939 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HADHAP40939 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HADHAP40939 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HADHAP40939 AC008549.2-201ENST00000333482 706 ntBASIC4.92□□□□□ -1.62
HADHAP40939 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.92□□□□□ -1.62
HADHAP40939 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.92□□□□□ -1.62
HADHAP40939 RNU2-6P-201ENST00000411404 190 ntBASIC4.92□□□□□ -1.62
HADHAP40939 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.92□□□□□ -1.62
HADHAP40939 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.92□□□□□ -1.62
HADHAP40939 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.92□□□□□ -1.62
HADHAP40939 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HADHAP40939 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.92□□□□□ -1.62
HADHAP40939 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.92□□□□□ -1.62
HADHAP40939 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.92□□□□□ -1.62
HADHAP40939 FABP7P2-201ENST00000429946 379 ntBASIC4.92□□□□□ -1.62
HADHAP40939 HSFY7P-201ENST00000432672 318 ntBASIC4.92□□□□□ -1.62
HADHAP40939 PSMD10P3-201ENST00000437000 448 ntBASIC4.92□□□□□ -1.62
HADHAP40939 HSFY8P-201ENST00000437934 318 ntBASIC4.92□□□□□ -1.62
HADHAP40939 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.92□□□□□ -1.62
HADHAP40939 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.92□□□□□ -1.62
HADHAP40939 HSFY5P-201ENST00000453726 309 ntBASIC4.92□□□□□ -1.62
HADHAP40939 RPS4XP6-201ENST00000477670 797 ntBASIC4.92□□□□□ -1.62
HADHAP40939 AC026414.1-201ENST00000504046 698 ntBASIC4.92□□□□□ -1.62
HADHAP40939 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.92□□□□□ -1.62
HADHAP40939 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.92□□□□□ -1.62
HADHAP40939 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.92□□□□□ -1.62
HADHAP40939 HMGB1P19-201ENST00000517578 577 ntBASIC4.92□□□□□ -1.62
HADHAP40939 AP003066.2-201ENST00000529375 555 ntBASIC4.92□□□□□ -1.62
HADHAP40939 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HADHAP40939 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HADHAP40939 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.92□□□□□ -1.62
HADHAP40939 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.92□□□□□ -1.62
HADHAP40939 MIR4512-201ENST00000583257 77 ntBASIC4.92□□□□□ -1.62
HADHAP40939 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.92□□□□□ -1.62
HADHAP40939 AC092953.2-201ENST00000608000 699 ntBASIC4.92□□□□□ -1.62
HADHAP40939 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.92□□□□□ -1.62
HADHAP40939 AC017104.5-201ENST00000637647 639 ntBASIC4.92□□□□□ -1.62
HADHAP40939 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HADHAP40939 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.92□□□□□ -1.62
HADHAP40939 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.92□□□□□ -1.62
HADHAP40939 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.92□□□□□ -1.62
HADHAP40939 AC007390.2-201ENST00000606229 3803 ntBASIC4.92□□□□□ -1.62
HADHAP40939 SCN1A-220ENST00000641603 12506 ntBASIC4.92□□□□□ -1.62
HADHAP40939 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
HADHAP40939 AC091046.3-201ENST00000631455 1574 ntBASIC4.91□□□□□ -1.62
HADHAP40939 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HADHAP40939 AC009643.2-201ENST00000603543 1448 ntBASIC4.91□□□□□ -1.62
HADHAP40939 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
HADHAP40939 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HADHAP40939 AC009951.1-201ENST00000623674 2614 ntBASIC4.91□□□□□ -1.62
HADHAP40939 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.91□□□□□ -1.62
HADHAP40939 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.91□□□□□ -1.62
HADHAP40939 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HADHAP40939 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
HADHAP40939 MIR525-201ENST00000384978 85 ntBASIC4.91□□□□□ -1.62
HADHAP40939 U3.35-201ENST00000408405 208 ntBASIC4.91□□□□□ -1.62
HADHAP40939 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.91□□□□□ -1.62
HADHAP40939 PRPF38AP2-201ENST00000438179 851 ntBASIC4.91□□□□□ -1.62
HADHAP40939 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.91□□□□□ -1.62
HADHAP40939 RNF2P1-201ENST00000442955 1010 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms