Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC12P31275 PARP4P2-201ENST00000446672 3326 ntBASIC5.63□□□□□ -1.51
HOXC12P31275 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC12P31275 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC12P31275 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXC12P31275 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC12P31275 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC12P31275 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXC12P31275 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC12P31275 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXC12P31275 USP9YP4-201ENST00000424401 1745 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC12P31275 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC12P31275 OR4A15-201ENST00000314706 1035 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXC12P31275 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC12P31275 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 RNU6-533P-201ENST00000384144 107 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 AL078604.1-201ENST00000404609 466 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 HMGN1P20-201ENST00000411849 300 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC12P31275 AC008280.1-201ENST00000418851 412 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 MRPS21P2-201ENST00000424704 264 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC12P31275 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXC12P31275 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 IGLV3-4-201ENST00000432300 244 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 MTND4LP10-201ENST00000435146 291 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC12P31275 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC12P31275 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 PSPHP1-201ENST00000450062 261 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 AC009963.3-201ENST00000458090 486 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 AC146507.1-201ENST00000468335 354 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 AC106872.3-201ENST00000495104 446 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 FTH1P8-201ENST00000498161 514 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 AC018645.1-201ENST00000505003 109 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.62□□□□□ -1.51
HOXC12P31275 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 AC091133.4-201ENST00000511142 308 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 ZNF519P4-201ENST00000514008 125 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 RN7SKP96-201ENST00000516948 297 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXC12P31275 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 MIR544B-201ENST00000582372 78 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 MIR4307-201ENST00000582802 84 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 GLYATL1P2-202ENST00000588046 902 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.62□□□□□ -1.51
HOXC12P31275 AL161729.4-201ENST00000604650 476 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 LARP7P1-201ENST00000605576 316 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 AC109309.2-201ENST00000612597 332 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXC12P31275 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXC12P31275 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXC12P31275 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC12P31275 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC12P31275 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HOXC12P31275 STX3-208ENST00000641815 3236 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC12P31275 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HOXC12P31275 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC12P31275 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
HOXC12P31275 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC12P31275 AC021242.1-201ENST00000507315 2035 ntBASIC5.62□□□□□ -1.51
HOXC12P31275 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC12P31275 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXC12P31275 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXC12P31275 TNPO1P2-201ENST00000426249 2665 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC12P31275 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
HOXC12P31275 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC12P31275 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HOXC12P31275 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC12P31275 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC12P31275 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
HOXC12P31275 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.61□□□□□ -1.51
HOXC12P31275 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC12P31275 COX6B1P3-201ENST00000312310 260 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC12P31275 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HOXC12P31275 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
HOXC12P31275 RNU1-85P-201ENST00000364127 164 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 RN7SKP69-201ENST00000365390 305 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 RN7SKP81-201ENST00000365603 331 ntBASIC5.61□□□□□ -1.51
HOXC12P31275 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
HOXC12P31275 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HOXC12P31275 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HOXC12P31275 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms