Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 CLUHP5-201ENST00000438421 774 ntBASIC8.47□□□□□ -1.05
CD44P16070 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC8.47□□□□□ -1.05
CD44P16070 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC8.47□□□□□ -1.05
CD44P16070 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC8.47□□□□□ -1.05
CD44P16070 RN7SL687P-201ENST00000480496 285 ntBASIC8.47□□□□□ -1.05
CD44P16070 AC010409.1-201ENST00000487382 476 ntBASIC8.47□□□□□ -1.05
CD44P16070 RPS4XP20-201ENST00000505751 772 ntBASIC8.47□□□□□ -1.05
CD44P16070 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC8.47□□□□□ -1.05
CD44P16070 RBM4-213ENST00000578778 582 ntTSL 4 BASIC8.47□□□□□ -1.05
CD44P16070 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC8.47□□□□□ -1.05
CD44P16070 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC8.47□□□□□ -1.05
CD44P16070 AP000843.1-201ENST00000624880 701 ntBASIC8.47□□□□□ -1.05
CD44P16070 TEX41-279ENST00000629149 609 ntTSL 5 BASIC8.47□□□□□ -1.05
CD44P16070 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC8.47□□□□□ -1.05
CD44P16070 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CD44P16070 OR7E161P-202ENST00000641994 1033 ntBASIC8.47□□□□□ -1.05
CD44P16070 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CD44P16070 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CD44P16070 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
CD44P16070 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC8.47□□□□□ -1.05
CD44P16070 NIPBL-202ENST00000448238 8729 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
CD44P16070 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CD44P16070 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
CD44P16070 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CD44P16070 HSPA8P11-201ENST00000508840 1898 ntBASIC8.47□□□□□ -1.05
CD44P16070 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
CD44P16070 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.47□□□□□ -1.05
CD44P16070 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
CD44P16070 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.46□□□□□ -1.05
CD44P16070 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
CD44P16070 AC090132.1-201ENST00000524071 1480 ntBASIC8.46□□□□□ -1.05
CD44P16070 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC8.46□□□□□ -1.05
CD44P16070 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CD44P16070 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8.46□□□□□ -1.06
CD44P16070 Y_RNA.44-201ENST00000362676 108 ntBASIC8.46□□□□□ -1.06
CD44P16070 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
CD44P16070 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
CD44P16070 RNU6-449P-201ENST00000383914 107 ntBASIC8.46□□□□□ -1.06
CD44P16070 RNU6-1056P-201ENST00000383996 107 ntBASIC8.46□□□□□ -1.06
CD44P16070 Y_RNA.435-201ENST00000384095 112 ntBASIC8.46□□□□□ -1.06
CD44P16070 C14orf2-202ENST00000414262 842 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CD44P16070 LINC00665-202ENST00000427868 690 ntTSL 3 BASIC8.46□□□□□ -1.06
CD44P16070 AL353597.2-202ENST00000434901 373 ntBASIC8.46□□□□□ -1.06
CD44P16070 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC8.46□□□□□ -1.06
CD44P16070 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC8.46□□□□□ -1.06
CD44P16070 AC239860.1-201ENST00000444680 1270 ntBASIC8.46□□□□□ -1.06
CD44P16070 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC8.46□□□□□ -1.06
CD44P16070 AL031736.1-201ENST00000449688 618 ntBASIC8.46□□□□□ -1.06
CD44P16070 AC087190.1-201ENST00000484462 480 ntBASIC8.46□□□□□ -1.06
CD44P16070 AC107032.1-201ENST00000485945 480 ntBASIC8.46□□□□□ -1.06
CD44P16070 RPL30P1-201ENST00000488676 339 ntBASIC8.46□□□□□ -1.06
CD44P16070 AL031073.1-201ENST00000503029 1139 ntBASIC8.46□□□□□ -1.06
CD44P16070 Y_RNA.686-201ENST00000516548 134 ntBASIC8.46□□□□□ -1.06
CD44P16070 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC8.46□□□□□ -1.06
CD44P16070 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
CD44P16070 OR7E1P-201ENST00000533891 958 ntBASIC8.46□□□□□ -1.06
CD44P16070 AP002001.1-203ENST00000534002 267 ntBASIC8.46□□□□□ -1.06
CD44P16070 AC025252.2-201ENST00000537470 502 ntBASIC8.46□□□□□ -1.06
CD44P16070 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CD44P16070 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC8.46□□□□□ -1.06
CD44P16070 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC8.46□□□□□ -1.06
CD44P16070 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC8.46□□□□□ -1.06
CD44P16070 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC8.46□□□□□ -1.06
CD44P16070 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC8.46□□□□□ -1.06
CD44P16070 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC8.46□□□□□ -1.06
CD44P16070 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CD44P16070 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CD44P16070 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CD44P16070 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC8.46□□□□□ -1.06
CD44P16070 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
CD44P16070 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC8.46□□□□□ -1.06
CD44P16070 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
CD44P16070 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
CD44P16070 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CD44P16070 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
CD44P16070 TROVE2-201ENST00000367441 1791 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
CD44P16070 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC8.45□□□□□ -1.06
CD44P16070 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CD44P16070 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
CD44P16070 AP000560.1-201ENST00000624150 1937 ntBASIC8.45□□□□□ -1.06
CD44P16070 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC8.45□□□□□ -1.06
CD44P16070 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CD44P16070 U8.7-201ENST00000364940 136 ntBASIC8.45□□□□□ -1.06
CD44P16070 Y_RNA.399-201ENST00000383955 105 ntBASIC8.45□□□□□ -1.06
CD44P16070 RNU6-214P-201ENST00000384130 107 ntBASIC8.45□□□□□ -1.06
CD44P16070 MIR654-201ENST00000385199 81 ntBASIC8.45□□□□□ -1.06
CD44P16070 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
CD44P16070 RNA5SP178-201ENST00000410380 128 ntBASIC8.45□□□□□ -1.06
CD44P16070 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC8.45□□□□□ -1.06
CD44P16070 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC8.45□□□□□ -1.06
CD44P16070 AL022100.1-202ENST00000421214 548 ntBASIC8.45□□□□□ -1.06
CD44P16070 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC8.45□□□□□ -1.06
CD44P16070 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC8.45□□□□□ -1.06
CD44P16070 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC8.45□□□□□ -1.06
CD44P16070 AL590682.1-201ENST00000437248 344 ntBASIC8.45□□□□□ -1.06
CD44P16070 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC8.45□□□□□ -1.06
CD44P16070 CDC42P2-201ENST00000448566 569 ntBASIC8.45□□□□□ -1.06
CD44P16070 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC8.45□□□□□ -1.06
CD44P16070 AC016724.1-201ENST00000453215 421 ntBASIC8.45□□□□□ -1.06
CD44P16070 RPL21P71-201ENST00000465598 459 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms